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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 42 43 44 45 46 47 48 49 50 ... 1720 1721 » 2251-2300 / 86044 show all
jmaeng-gatk	INDEL	D16_PLUS	*	hetalt	96.0050	92.9126	99.3103	38.0720	1796	137	2016	14	14	100.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002complexvar	hetalt	92.1538	87.8543	96.8958	47.4971	217	30	437	14	14	100.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002compoundhet	hetalt	96.2053	93.0498	99.5822	25.8327	1794	134	1907	8	8	100.0000
jmaeng-gatk	INDEL	D16_PLUS	HG002compoundhet	homalt	47.0588	100.0000	30.7692	74.2574	8	0	8	18	18	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	94.0868	89.5385	99.1220	39.9179	873	102	1016	9	9	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.2580	95.1314	99.4819	36.3636	1231	63	1344	7	7	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.0284	92.9570	99.3097	38.0196	1795	136	2014	14	14	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	93.6701	88.9527	98.9160	37.4576	620	77	730	8	8	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.8238	92.6407	99.2335	33.1757	1498	119	1683	13	13	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	97.6407	97.4133	97.8690	64.6778	1883	50	1883	41	41	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	het	95.8781	99.0512	92.9019	82.4220	522	5	445	34	34	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.3707	95.3390	99.4908	31.5202	900	44	977	5	5	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	99.6757	99.7835	99.5680	64.0528	461	1	461	2	2	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	95.7772	92.5409	99.2481	35.3886	1526	123	1716	13	13	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.0284	92.9570	99.3097	38.0196	1795	136	2014	14	14	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.5532	95.6633	99.5192	32.7405	750	34	828	4	4	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_diTR_51to200	hetalt	91.6464	84.7380	99.7812	34.5272	372	67	456	1	1	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	97.5490	96.0366	99.1098	37.5926	315	13	334	3	3	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	96.2835	94.0000	98.6807	34.4291	329	21	374	5	5	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.0583	99.0196	97.1154	64.1379	101	1	101	3	3	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	*	98.7179	98.0892	99.3548	70.4198	154	3	154	1	1	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_11to50	het	98.3329	98.3607	98.3051	81.7901	60	1	58	1	1	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	*	92.1348	89.1304	95.3488	68.1481	41	5	41	2	2	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	het	78.9474	75.0000	83.3333	90.9091	6	2	5	1	1	100.0000
jmaeng-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_triTR_51to200	homalt	96.2963	100.0000	92.8571	48.1481	13	0	13	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	*	hetalt	96.3487	93.3431	99.5544	62.8913	9563	682	9606	43	43	100.0000
jmaeng-gatk	INDEL	D1_5	HG002complexvar	hetalt	92.2064	88.1657	96.6354	72.5869	1192	160	1235	43	43	100.0000
jmaeng-gatk	INDEL	D1_5	HG002compoundhet	hetalt	96.4037	93.4123	99.5930	58.4493	9543	673	9543	39	39	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.9241	87.1570	99.5086	30.3082	1588	234	1620	8	8	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.6913	98.9362	92.6526	62.5292	744	8	744	59	59	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.0103	94.5783	99.5706	64.1494	8792	504	8811	38	38	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.4888	93.5852	99.5783	30.8129	8695	596	8738	37	37	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.2248	99.2248	99.2248	63.9161	256	2	256	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	94.3662	90.5405	98.5294	79.5181	67	7	67	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7255	99.8168	99.6344	78.0409	545	1	545	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.7175	99.6237	99.8115	81.3892	1059	4	1059	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	94.4444	91.8919	97.1429	86.3281	34	3	34	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8647	100.0000	99.7297	82.0301	369	0	369	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.8530	86.9868	99.5675	29.4261	1123	168	1151	5	5	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	94.1029	98.9446	89.7129	61.3321	375	4	375	43	43	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.4972	93.5639	99.6204	24.2463	7574	521	7610	29	29	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.1401	94.7708	99.6309	23.4581	6470	357	6479	24	24	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.4599	93.4908	99.6237	26.2417	7641	532	7678	29	29	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.4888	93.5852	99.5783	30.8129	8695	596	8738	37	37	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	96.7472	94.1475	99.4946	23.8423	6483	403	6496	33	33	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	81.9280	69.6538	99.4536	27.2366	342	149	364	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	74.4444	94.3662	61.4679	54.5833	67	4	67	42	42	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	95.0580	91.2409	99.2084	70.4829	375	36	376	3	3	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9361	99.9509	99.9214	54.3780	10173	5	10173	8	8	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.2315	96.7180	99.7931	31.3447	1444	49	1447	3	3	100.0000

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