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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
1351-1400 / 86044 show all
ltrigg-rtg2INDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3495
98.9177
99.7849
42.8747
457546411
100.0000
ltrigg-rtg2INDELD1_5map_l100_m0_e0homalt
98.6294
97.6744
99.6032
75.2456
252625111
100.0000
ltrigg-rtg2INDELD1_5map_l100_m1_e0homalt
98.8920
97.9730
99.8285
75.6067
5801258211
100.0000
ltrigg-rtg2INDELD1_5map_l100_m2_e0homalt
98.8432
97.8723
99.8336
76.9113
5981360011
100.0000
ltrigg-rtg2INDELD1_5map_l100_m2_e1homalt
98.8603
97.9032
99.8363
77.0646
6071361011
100.0000
ltrigg-rtg2INDELD1_5map_l125_m0_e0homalt
98.2935
97.2973
99.3103
79.6919
144414411
100.0000
ltrigg-rtg2INDELD1_5map_l125_m1_e0homalt
98.6971
97.7077
99.7067
78.8724
341834011
100.0000
ltrigg-rtg2INDELD1_5map_l125_m2_e0homalt
98.7513
97.8022
99.7191
80.2770
356835511
100.0000
ltrigg-rtg2INDELD1_5map_l150_m0_e0homalt
97.0060
95.2941
98.7805
84.6154
8148111
100.0000
ltrigg-rtg2INDELD1_5map_l150_m1_e0homalt
98.6726
97.8070
99.5536
81.3644
223522311
100.0000
ltrigg-rtg2INDELD1_5map_l150_m2_e0homalt
98.5386
97.5207
99.5781
82.8261
236623611
100.0000
ltrigg-rtg2INDELD1_5map_l150_m2_e1homalt
98.5752
97.5806
99.5902
82.7562
242624311
100.0000
ltrigg-rtg2INDELD1_5map_sirenhetalt
95.1069
92.8571
97.4684
93.2536
7867722
100.0000
ltrigg-rtg2INDELD6_15*hetalt
97.5461
95.7915
99.3661
40.2288
783034478385050
100.0000
ltrigg-rtg2INDELD6_15HG002complexvarhetalt
94.0012
92.3001
95.7661
55.0113
935789504242
100.0000
ltrigg-rtg2INDELD6_15HG002compoundhethetalt
97.6303
95.8410
99.4878
26.1770
781233977694040
100.0000
ltrigg-rtg2INDELD6_15HG002compoundhethomalt
84.6862
95.8333
75.8621
56.0606
2312277
100.0000
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
94.9326
91.0397
99.1732
34.1898
215421221591818
100.0000
ltrigg-rtg2INDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
98.3080
97.2255
99.4149
40.8780
662318966273939
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.5228
95.7439
99.3691
35.4149
771634377184949
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.3746
94.5455
98.2759
71.1443
5235711
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.6510
99.4206
99.8824
57.6060
858584911
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
95.4736
93.9394
97.0588
74.6269
3123311
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
94.6844
90.6909
99.0458
31.4136
154915915571515
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
95.0134
91.7620
98.5037
40.9426
4013639566
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
97.6454
95.9224
99.4314
31.5401
682229068203939
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
98.5007
97.2896
99.7423
37.1878
272876270977
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
98.5228
97.5359
99.5300
31.9212
530413452942525
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.1277
98.3122
99.9569
36.7876
233040231711
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
97.6517
95.9297
99.4366
32.4551
688229268833939
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.6736
97.5987
99.7724
40.0818
308976306877
100.0000
ltrigg-rtg2INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.5228
95.7439
99.3691
35.4149
771634377184949
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
98.1891
97.1291
99.2726
27.7365
463513746403434
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_diTR_11to50homalt
98.8091
97.7471
99.8946
29.7927
190944189522
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
90.6252
83.1422
99.5885
23.9833
72514772633
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
86.1876
77.6398
96.8504
18.5897
1253612344
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.3665
97.2973
97.4359
71.7391
3613811
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
94.5924
91.2281
98.2143
99.2499
5255511
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
88.8889
88.8889
88.8889
99.5220
81811
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.6342
97.8003
99.4823
38.0876
115626115366
100.0000
ltrigg-rtg2INDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
96.8466
94.9559
98.8142
35.1282
7534075099
100.0000
ltrigg-rtg2INDELI16_PLUS*hetalt
90.2131
82.6025
99.3685
50.0717
173336517311111
100.0000
ltrigg-rtg2INDELI16_PLUSHG002complexvarhetalt
89.8660
82.0896
99.2701
60.2899
2756027222
100.0000
ltrigg-rtg2INDELI16_PLUSHG002complexvarhomalt
95.2945
94.1748
96.4413
53.1667
291182711010
100.0000
ltrigg-rtg2INDELI16_PLUSHG002compoundhethetalt
90.2840
82.6087
99.5316
37.2520
1729364170088
100.0000
ltrigg-rtg2INDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
81.4336
70.9302
95.5882
72.4696
61256533
100.0000
ltrigg-rtg2INDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
70.9091
60.0000
86.6667
81.7073
15101322
100.0000
ltrigg-rtg2INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
90.9728
84.5626
98.4344
65.7965
4939050388
100.0000
ltrigg-rtg2INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
92.6496
93.4426
91.8699
73.4341
11481131010
100.0000
ltrigg-rtg2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
90.2206
83.1563
98.5965
64.1509
54811156288
100.0000