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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 243 244 245 246 247 248 249 250 251 ... 1720 1721 » 12301-12350 / 86044 show all
ciseli-custom	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	49.7009	35.0282	85.5263	70.6564	62	115	65	11	10	90.9091
ciseli-custom	INDEL	I6_15	map_l100_m1_e0	*	28.7671	18.4211	65.6250	88.7719	21	93	21	11	10	90.9091
ciseli-custom	INDEL	I6_15	map_l100_m2_e0	*	29.5302	18.9655	66.6667	89.9083	22	94	22	11	10	90.9091
ciseli-custom	INDEL	I6_15	map_l100_m2_e1	*	29.5302	18.9655	66.6667	90.0000	22	94	22	11	10	90.9091
cchapple-custom	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	het	93.9285	91.4672	96.5260	44.7581	879	82	3362	121	110	90.9091
cchapple-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	93.9600	91.6530	96.3860	42.0652	560	51	2347	88	80	90.9091
cchapple-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	97.3872	100.0000	94.9074	87.3684	205	0	205	11	10	90.9091
cchapple-custom	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	97.3872	100.0000	94.9074	87.3684	205	0	205	11	10	90.9091
ckim-gatk	INDEL	D6_15	HG002complexvar	*	98.1151	97.6990	98.5347	58.5306	5180	122	5178	77	70	90.9091
cchapple-custom	INDEL	I6_15	HG002complexvar	*	97.5496	96.4942	98.6284	54.8042	4624	168	4746	66	60	90.9091
ckim-gatk	SNP	*	HG002compoundhet	homalt	99.4644	99.0354	99.8971	35.0629	10678	104	10677	11	10	90.9091
ckim-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.4505	99.3666	99.5347	87.4509	2353	15	2353	11	10	90.9091
ckim-isaac	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	79.5118	70.0599	91.9118	65.9148	117	50	125	11	10	90.9091
ckim-isaac	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	92.5151	89.5327	95.7031	72.8238	479	56	490	22	20	90.9091
ckim-dragen	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	*	97.9137	96.7068	99.1511	64.1489	5139	175	5139	44	40	90.9091
ckim-dragen	SNP	ti	map_l100_m2_e0	homalt	99.6194	99.3610	99.8792	57.3994	18192	117	18197	22	20	90.9091
ckim-dragen	SNP	ti	map_l100_m2_e1	homalt	99.6178	99.3565	99.8804	57.3860	18375	119	18380	22	20	90.9091
ckim-dragen	SNP	ti	map_l150_m0_e0	homalt	99.3100	99.0221	99.5996	68.7592	2734	27	2736	11	10	90.9091
gduggal-bwaplat	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	68.2119	54.7872	90.3509	80.9683	103	85	103	11	10	90.9091
gduggal-bwaplat	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	74.3814	59.9765	97.8927	91.3619	511	341	511	11	10	90.9091
gduggal-bwavard	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	23.9090	13.7056	93.5673	71.9672	162	1020	160	11	10	90.9091
eyeh-varpipe	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	28.6738	21.7391	42.1053	61.2245	5	18	8	11	10	90.9091
eyeh-varpipe	INDEL	D1_5	map_l125_m1_e0	homalt	97.9462	98.2808	97.6139	87.6142	343	6	450	11	10	90.9091
eyeh-varpipe	INDEL	D1_5	map_l125_m2_e0	homalt	98.0337	98.3516	97.7178	87.9259	358	6	471	11	10	90.9091
eyeh-varpipe	INDEL	D1_5	map_l125_m2_e1	homalt	98.0724	98.3871	97.7597	87.9775	366	6	480	11	10	90.9091
eyeh-varpipe	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	19.0780	10.6557	91.0204	63.7574	182	1526	223	22	20	90.9091
eyeh-varpipe	INDEL	D6_15	map_l100_m1_e0	homalt	75.3723	82.8125	69.1589	84.6705	53	11	74	33	30	90.9091
eyeh-varpipe	INDEL	D6_15	map_l125_m2_e0	homalt	81.4394	83.3333	79.6296	89.0909	30	6	43	11	10	90.9091
eyeh-varpipe	INDEL	D6_15	map_l125_m2_e1	homalt	81.6539	83.7838	79.6296	89.2644	31	6	43	11	10	90.9091
eyeh-varpipe	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	11.8946	6.7961	47.6190	65.8537	14	192	20	22	20	90.9091
eyeh-varpipe	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	83.4783	85.7143	81.3559	70.4013	42	7	144	33	30	90.9091
gduggal-bwafb	INDEL	I16_PLUS	lowcmp_AllRepeats_51to200bp_gt95identity_merged	*	18.4100	10.6796	66.6667	69.1589	22	184	22	11	10	90.9091
gduggal-bwafb	SNP	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7040	99.5894	99.8189	55.7321	6063	25	6063	11	10	90.9091
gduggal-bwaplat	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	76.0853	63.1134	95.7692	72.6027	746	436	747	33	30	90.9091
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_diTR_51to200	homalt	59.5825	43.7326	93.4524	71.9533	157	202	157	11	10	90.9091
gduggal-bwaplat	INDEL	*	lowcmp_SimpleRepeat_quadTR_51to200	homalt	85.6847	76.6260	97.1722	71.5227	377	115	378	11	10	90.9091
gduggal-bwaplat	INDEL	*	map_siren	homalt	83.1471	71.4501	99.4235	85.0984	1897	758	1897	11	10	90.9091
gduggal-bwaplat	INDEL	D16_PLUS	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	85.3755	75.1159	98.8810	48.3447	972	322	972	11	10	90.9091
gduggal-bwafb	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	75.5515	69.4611	82.8125	75.1938	116	51	53	11	10	90.9091
gduggal-snapvard	INDEL	I1_5	HG002compoundhet	homalt	81.6095	75.9878	88.1295	56.7652	250	79	245	33	30	90.9091
ghariani-varprowl	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	48.6558	37.7049	68.5714	84.9138	23	38	24	11	10	90.9091
gduggal-snapfb	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	92.1833	90.4762	93.9560	39.3333	418	44	171	11	10	90.9091
gduggal-snapfb	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	73.7705	60.1604	95.3390	57.0128	225	149	225	11	10	90.9091
gduggal-snapfb	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	42.8116	28.1132	89.7196	42.4731	149	381	96	11	10	90.9091
gduggal-snapfb	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	70.1721	68.3616	72.0812	51.2376	121	56	142	55	50	90.9091
gduggal-snapvard	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	*	40.1132	30.9859	56.8627	26.6187	44	98	58	44	40	90.9091
gduggal-snapvard	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_51to200	het	48.0929	41.6667	56.8627	26.6187	10	14	58	44	40	90.9091
hfeng-pmm2	INDEL	*	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9159	99.9292	99.9026	55.9613	11288	8	11288	11	10	90.9091
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	96.7495	97.6834	95.8333	57.2816	253	6	253	11	10	90.9091
hfeng-pmm2	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	98.8186	99.1632	98.4765	57.3034	711	6	711	11	10	90.9091

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