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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 242 243 244 245 246 247 248 249 250 ... 1720 1721 » 12251-12300 / 86044 show all
bgallagher-sentieon	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	homalt	97.2152	100.0000	94.5813	46.4380	192	0	192	11	10	90.9091
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	homalt	96.8974	99.0244	94.8598	91.2653	203	2	203	11	10	90.9091
astatham-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	96.8974	99.0244	94.8598	91.2653	203	2	203	11	10	90.9091
astatham-gatk	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	het	97.6650	96.0317	99.3548	89.1657	1694	70	1694	11	10	90.9091
astatham-gatk	SNP	ti	map_l125_m1_e0	homalt	99.4818	99.0675	99.8996	63.1497	10942	103	10942	11	10	90.9091
astatham-gatk	SNP	ti	map_l125_m2_e0	homalt	99.4872	99.0755	99.9023	65.7910	11253	105	11253	11	10	90.9091
astatham-gatk	SNP	ti	map_l125_m2_e1	homalt	99.4917	99.0836	99.9032	65.8143	11353	105	11353	11	10	90.9091
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.3023	95.7627	98.8922	32.9054	904	40	982	11	10	90.9091
asubramanian-gatk	INDEL	D16_PLUS	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	95.0937	93.1429	97.1279	35.7383	326	24	372	11	10	90.9091
anovak-vg	INDEL	I1_5	map_l250_m2_e0	homalt	68.7117	88.8889	56.0000	95.0723	40	5	42	33	30	90.9091
anovak-vg	INDEL	I1_5	map_l250_m2_e1	homalt	69.2187	89.1304	56.5789	95.1592	41	5	43	33	30	90.9091
astatham-gatk	INDEL	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	94.4480	96.6024	92.3875	77.6266	2104	74	1869	154	140	90.9091
anovak-vg	INDEL	*	lowcmp_SimpleRepeat_triTR_51to200	homalt	27.3141	19.1489	47.6190	61.1111	9	38	10	11	10	90.9091
anovak-vg	INDEL	*	tech_badpromoters	*	66.4036	56.5789	80.3571	44.5545	43	33	45	11	10	90.9091
anovak-vg	INDEL	D6_15	map_siren	homalt	83.4332	77.6923	90.0901	82.2967	101	29	100	11	10	90.9091
qzeng-custom	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	het	88.7617	87.5000	90.0602	60.8952	252	36	598	66	60	90.9091
ndellapenna-hhga	INDEL	*	lowcmp_SimpleRepeat_triTR_11to50	hetalt	81.2517	69.3391	98.1067	37.6609	640	283	570	11	10	90.9091
mlin-fermikit	INDEL	D6_15	segdup	het	89.9018	91.3043	88.5417	91.7241	84	8	85	11	10	90.9091
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	het	82.8241	83.7838	81.8862	84.4940	558	108	547	121	110	90.9091
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	90.3250	96.7213	84.7222	88.5350	59	2	61	11	10	90.9091
mlin-fermikit	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	het	82.8241	83.7838	81.8862	84.4940	558	108	547	121	110	90.9091
mlin-fermikit	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	97.9157	97.2833	98.5564	70.7710	752	21	751	11	10	90.9091
mlin-fermikit	INDEL	I6_15	map_l100_m1_e0	*	76.2909	67.5439	87.6404	81.8367	77	37	78	11	10	90.9091
mlin-fermikit	INDEL	I6_15	map_l100_m2_e0	*	76.7503	68.1034	87.9121	83.6036	79	37	80	11	10	90.9091
mlin-fermikit	INDEL	I6_15	map_l100_m2_e1	*	76.7503	68.1034	87.9121	83.9789	79	37	80	11	10	90.9091
ndellapenna-hhga	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.6789	94.2328	99.2552	26.5783	4379	268	4398	33	30	90.9091
ndellapenna-hhga	INDEL	I6_15	*	hetalt	95.2209	91.6969	99.0267	38.6839	7841	710	7834	77	70	90.9091
ndellapenna-hhga	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.0531	98.7414	99.3667	63.5237	1726	22	1726	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m1_e0	homalt	99.6799	99.4589	99.9020	69.8014	11212	61	11212	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m2_e0	homalt	99.6916	99.4786	99.9056	72.3853	11638	61	11638	11	10	90.9091
ndellapenna-hhga	SNP	*	map_l150_m2_e1	homalt	99.6950	99.4842	99.9066	72.4121	11766	61	11766	11	10	90.9091
ndellapenna-hhga	SNP	ti	map_siren	homalt	99.8244	99.7072	99.9418	51.3860	37805	111	37806	22	20	90.9091
rpoplin-dv42	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	95.4200	94.0678	96.8116	67.6966	333	21	334	11	10	90.9091
dgrover-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	98.1090	96.6453	99.6177	51.2288	5733	199	5733	22	20	90.9091
egarrison-hhga	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	76.5171	62.3875	98.9208	32.6004	4296	2590	4033	44	40	90.9091
egarrison-hhga	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	93.5628	88.9960	98.6237	42.7471	3138	388	3153	44	40	90.9091
egarrison-hhga	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	93.5628	88.9960	98.6237	42.7471	3138	388	3153	44	40	90.9091
egarrison-hhga	SNP	*	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	99.0531	98.7414	99.3667	63.7370	1726	22	1726	11	10	90.9091
ckim-isaac	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	82.2286	71.0963	97.4943	44.8492	428	174	428	11	10	90.9091
ckim-isaac	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	92.8637	87.9925	98.3058	30.4621	4199	573	4468	77	70	90.9091
ckim-isaac	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	85.7762	80.3859	91.9414	59.8529	250	61	251	22	20	90.9091
ckim-vqsr	INDEL	D6_15	HG002complexvar	*	98.0282	97.5292	98.5322	58.5722	5171	131	5169	77	70	90.9091
ckim-vqsr	SNP	*	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	*	99.4293	99.3243	99.5345	87.4555	2352	16	2352	11	10	90.9091
ckim-dragen	INDEL	D16_PLUS	HG002complexvar	homalt	95.9866	99.3080	92.8803	75.5924	287	2	287	22	20	90.9091
ckim-dragen	INDEL	D1_5	HG002complexvar	homalt	99.7544	99.8207	99.6881	60.4958	10579	19	10549	33	30	90.9091
ckim-dragen	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	97.8131	97.1129	98.5235	67.3246	740	22	734	11	10	90.9091
ciseli-custom	INDEL	D16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	88.6698	84.9899	92.6829	52.2246	419	74	418	33	30	90.9091
ciseli-custom	INDEL	D16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	76.3636	91.3043	65.6250	76.2963	21	2	21	11	10	90.9091
ciseli-custom	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	*	33.8948	28.9913	40.7948	49.7853	799	1957	811	1177	1070	90.9091
ciseli-custom	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	*	10.3004	6.3830	26.6667	77.2727	3	44	4	11	10	90.9091

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