PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 1674 1675 1676 1677 1678 1679 1680 1681 1682 ... 1720 1721 » 83851-83900 / 86044 show all
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	98.1481	1	0	1	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.3684	1	0	1	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9992	1	0	1	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	hetalt	100.0000	100.0000	100.0000	99.9912	1	0	1	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_gt10	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	100.0000	100.0000	100.0000	41.8452	1330	0	1330	0	0
bgallagher-sentieon	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	93.4783	87.7551	100.0000	25.8621	43	6	43	0	0
bgallagher-sentieon	INDEL	D1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	97.4576	3	0	3	0	0
bgallagher-sentieon	INDEL	D1_5	map_l125_m1_e0	hetalt	96.0000	92.3077	100.0000	95.2569	12	1	12	0	0
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e0	hetalt	96.5517	93.3333	100.0000	95.2055	14	1	14	0	0
bgallagher-sentieon	INDEL	D1_5	map_l125_m2_e1	hetalt	96.5517	93.3333	100.0000	95.3177	14	1	14	0	0
bgallagher-sentieon	INDEL	D1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	97.7011	2	0	2	0	0
bgallagher-sentieon	INDEL	D1_5	map_l150_m1_e0	hetalt	92.3077	85.7143	100.0000	97.0297	6	1	6	0	0
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e0	hetalt	92.3077	85.7143	100.0000	97.3799	6	1	6	0	0
bgallagher-sentieon	INDEL	D1_5	map_l150_m2_e1	hetalt	93.3333	87.5000	100.0000	97.0213	7	1	7	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m0_e0	homalt	100.0000	100.0000	100.0000	97.3085	13	0	13	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	97.1429	3	0	3	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m1_e0	homalt	99.1150	98.2456	100.0000	94.2387	56	1	56	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	97.6744	3	0	3	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m2_e0	homalt	99.1597	98.3333	100.0000	94.6895	59	1	59	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	97.7444	3	0	3	0	0
bgallagher-sentieon	INDEL	D1_5	map_l250_m2_e1	homalt	99.1597	98.3333	100.0000	94.8381	59	1	59	0	0
bgallagher-sentieon	INDEL	D1_5	segdup	hetalt	99.0291	98.0769	100.0000	95.2425	51	1	52	0	0
bgallagher-sentieon	INDEL	D1_5	segdupwithalt	*	100.0000	100.0000	100.0000	99.9942	1	0	1	0	0
bgallagher-sentieon	INDEL	D1_5	segdupwithalt	het	100.0000	100.0000	100.0000	99.9912	1	0	1	0	0
bgallagher-sentieon	INDEL	D1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D1_5	tech_badpromoters	*	97.2973	94.7368	100.0000	48.5714	18	1	18	0	0
bgallagher-sentieon	INDEL	D1_5	tech_badpromoters	het	93.3333	87.5000	100.0000	58.8235	7	1	7	0	0
bgallagher-sentieon	INDEL	D1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	0.0000	2	0	2	0	0
bgallagher-sentieon	INDEL	D1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	43.7500	9	0	9	0	0
bgallagher-sentieon	INDEL	D6_15	decoy	*	100.0000	100.0000	100.0000	99.9097	1	0	1	0	0
bgallagher-sentieon	INDEL	D6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D6_15	decoy	hetalt	100.0000	100.0000	100.0000	99.0991	1	0	1	0	0
bgallagher-sentieon	INDEL	D6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	D6_15	func_cds	*	100.0000	100.0000	100.0000	55.2083	43	0	43	0	0
bgallagher-sentieon	INDEL	D6_15	func_cds	het	100.0000	100.0000	100.0000	51.6667	29	0	29	0	0
bgallagher-sentieon	INDEL	D6_15	func_cds	hetalt	100.0000	100.0000	100.0000	60.0000	2	0	2	0	0
bgallagher-sentieon	INDEL	D6_15	func_cds	homalt	100.0000	100.0000	100.0000	61.2903	12	0	12	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	97.1429	6	0	6	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het	100.0000	100.0000	100.0000	97.8571	3	0	3	0	0
bgallagher-sentieon	INDEL	D6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	89.4737	2	0	2	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge