PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
83151-83200 / 86044 show all
asubramanian-gatkSNPtvtech_badpromotershet
98.4615
96.9697
100.0000
56.1644
3213200
asubramanian-gatkSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDEL*decoy*
100.0000
100.0000
100.0000
99.9337
1001000
bgallagher-sentieonINDEL*decoyhet
100.0000
100.0000
100.0000
99.9414
60600
bgallagher-sentieonINDEL*decoyhetalt
100.0000
100.0000
100.0000
99.8252
10100
bgallagher-sentieonINDEL*decoyhomalt
100.0000
100.0000
100.0000
99.9295
30300
bgallagher-sentieonINDEL*func_cdshetalt
88.8889
80.0000
100.0000
60.0000
41400
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4118
1201200
bgallagher-sentieonINDEL*lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.7391
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.6045
86.2275
100.0000
68.7898
1442314700
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.4856
1001000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.3415
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.7273
30300
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9167
20200
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
96.1538
10100
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.8731
1601600
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.9633
2102100
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*lowcmp_SimpleRepeat_triTR_51to200hetalt
96.2656
92.8000
100.0000
29.3413
116911800
bgallagher-sentieonINDEL*map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
94.9541
1101100
bgallagher-sentieonINDEL*map_l125_m1_e0hetalt
97.4359
95.0000
100.0000
91.8455
3823800
bgallagher-sentieonINDEL*map_l125_m2_e0hetalt
97.5610
95.2381
100.0000
92.5512
4024000
bgallagher-sentieonINDEL*map_l125_m2_e1hetalt
96.3855
93.0233
100.0000
92.6874
4034000
bgallagher-sentieonINDEL*map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
94.4785
90900
bgallagher-sentieonINDEL*map_l150_m1_e0hetalt
97.5610
95.2381
100.0000
94.2693
2012000
bgallagher-sentieonINDEL*map_l150_m2_e0hetalt
97.5610
95.2381
100.0000
94.9875
2012000
bgallagher-sentieonINDEL*map_l150_m2_e1hetalt
95.4545
91.3043
100.0000
94.8655
2122100
bgallagher-sentieonINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.7033
60600
bgallagher-sentieonINDEL*map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.3094
60600
bgallagher-sentieonINDEL*map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.3684
60600
bgallagher-sentieonINDEL*segduphetalt
96.4143
93.0769
100.0000
94.3681
121912300
bgallagher-sentieonINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9974
10100
bgallagher-sentieonINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9960
10100
bgallagher-sentieonINDEL*segdupwithalthetalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*segdupwithalthomalt
0.0000
100.0000
00000
bgallagher-sentieonINDEL*tech_badpromoters*
99.3377
98.6842
100.0000
54.5455
7517500
bgallagher-sentieonINDEL*tech_badpromotershet
98.7013
97.4359
100.0000
52.5000
3813800
bgallagher-sentieonINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
bgallagher-sentieonINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
57.1429
3303300
bgallagher-sentieonINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000