PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82751-82800 / 86044 show all
anovak-vgINDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15map_sirenhomalt
0.0000
100.0000
00000
anovak-vgINDELC6_15segdup*
0.0000
100.0000
00000
anovak-vgINDELC6_15segduphet
0.0000
100.0000
00000
anovak-vgINDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15segduphomalt
0.0000
100.0000
00000
anovak-vgINDELC6_15segdupwithalt*
0.0000
100.0000
00000
anovak-vgINDELC6_15segdupwithalthet
0.0000
100.0000
00000
anovak-vgINDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15segdupwithalthomalt
0.0000
100.0000
00000
anovak-vgINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUS*hetalt
0.0000
16.4511
0.0000
0.0000
3181615000
anovak-vgINDELD16_PLUSHG002complexvarhetalt
0.0000
17.4089
0.0000
0.0000
43204000
anovak-vgINDELD16_PLUSHG002compoundhethetalt
0.0000
16.4938
0.0000
0.0000
3181610000
anovak-vgINDELD16_PLUSdecoy*
66.6667
50.0000
100.0000
98.7603
33300
anovak-vgINDELD16_PLUSdecoyhet
66.6667
50.0000
100.0000
98.9848
22200
anovak-vgINDELD16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSdecoyhomalt
66.6667
50.0000
100.0000
97.7778
11100
anovak-vgINDELD16_PLUSfunc_cds*
80.0000
66.6667
100.0000
60.0000
84800
anovak-vgINDELD16_PLUSfunc_cdshet
76.9231
62.5000
100.0000
64.2857
53500
anovak-vgINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSfunc_cdshomalt
85.7143
75.0000
100.0000
50.0000
31300
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
11.1795
0.0000
0.0000
109866000
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
20.0155
0.0000
0.0000
2591035000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
16.4164
0.0000
0.0000
3171614000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
18.1818
0.0000
0.0000
29000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
36.8421
0.0000
0.0000
712000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
41.6667
0.0000
0.0000
57000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
11.3343
0.0000
0.0000
79618000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
0.0000
100.0000
0.0000
00100
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
100.0000
0.0000
00100
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
16.9450
0.0000
0.0000
2741343000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
20.6568
0.0000
0.0000
195749000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
16.7981
0.0000
0.0000
2771372000
anovak-vgINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
16.4164
0.0000
0.0000
3171614000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
19.7704
0.0000
0.0000
155629000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
9.1116
0.0000
0.0000
40399000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
8.3333
0.0000
0.0000
111000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10het
48.2759
31.8182
100.0000
91.5730
14301500
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
09000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
22.5610
0.0000
0.0000
74254000
anovak-vgINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
11.4286
0.0000
0.0000
40310000