PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
80601-80650 / 86044 show all
qzeng-customINDELD6_15map_l125_m1_e0hetalt
0.0000
89.4737
0.0000
0.0000
172000
qzeng-customINDELD6_15map_l125_m2_e0hetalt
0.0000
89.4737
0.0000
0.0000
172000
qzeng-customINDELD6_15map_l125_m2_e1hetalt
0.0000
85.0000
0.0000
0.0000
173000
qzeng-customINDELD6_15map_l150_m0_e0hetalt
0.0000
80.0000
0.0000
0.0000
41000
qzeng-customINDELD6_15map_l150_m1_e0hetalt
0.0000
87.5000
0.0000
0.0000
71000
qzeng-customINDELD6_15map_l150_m2_e0hetalt
0.0000
87.5000
0.0000
0.0000
71000
qzeng-customINDELD6_15map_l150_m2_e1hetalt
0.0000
77.7778
0.0000
0.0000
72000
qzeng-customINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15map_l250_m0_e0homalt
66.6667
50.0000
100.0000
97.5309
11200
qzeng-customINDELD6_15map_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
qzeng-customINDELD6_15map_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
qzeng-customINDELD6_15map_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
20000
qzeng-customINDELD6_15map_sirenhetalt
0.0000
82.8283
0.0000
0.0000
8217000
qzeng-customINDELD6_15segduphetalt
0.0000
81.6327
0.0000
0.0000
409000
qzeng-customINDELD6_15segdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
qzeng-customINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
48.4848
1701700
qzeng-customINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
41.1765
1001000
qzeng-customINDELD6_15tech_badpromotershetalt
0.0000
100.0000
0.0000
0.0000
10000
qzeng-customINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
56.2500
60700
qzeng-customINDELI16_PLUSdecoy*
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSdecoyhet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
qzeng-customINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
74.4526
59.3023
100.0000
68.1818
51354200
qzeng-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
83.8710
72.2222
100.0000
73.9130
1351200
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
90.6250
82.8571
100.0000
80.8219
2961400
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
97.4359
95.0000
100.0000
80.0000
191700
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
70.3297
54.2373
100.0000
61.4286
32272700
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
100.0000
02000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
78.2609
64.2857
100.0000
80.4878
1810800
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200hetalt
72.2222
56.5217
100.0000
76.0000
1310600
qzeng-customINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000