PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
79251-79300 / 86044 show all | |||||||||||||||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_quadTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_11to50 | hetalt | 99.3631 | 98.7342 | 100.0000 | 24.9201 | 234 | 3 | 235 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_11to50 | homalt | 100.0000 | 100.0000 | 100.0000 | 57.2464 | 59 | 0 | 59 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | * | 81.8182 | 69.2308 | 100.0000 | 70.0000 | 9 | 4 | 9 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | het | 100.0000 | 100.0000 | 1 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | hetalt | 80.0000 | 66.6667 | 100.0000 | 35.7143 | 8 | 4 | 9 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_51to200 | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_gt200 | * | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_gt200 | het | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_gt200 | hetalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | lowcmp_SimpleRepeat_triTR_gt200 | homalt | 0.0000 | 0.0000 | 0.0000 | 0 | 0 | 0 | 0 | 0 | |||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m0_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 88.5714 | 4 | 0 | 4 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m0_e0 | homalt | 85.7143 | 75.0000 | 100.0000 | 91.1765 | 9 | 3 | 9 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m1_e0 | homalt | 93.5484 | 87.8788 | 100.0000 | 86.3850 | 29 | 4 | 29 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e0 | homalt | 93.5484 | 87.8788 | 100.0000 | 87.7637 | 29 | 4 | 29 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l100_m2_e1 | homalt | 93.5484 | 87.8788 | 100.0000 | 88.0658 | 29 | 4 | 29 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m0_e0 | homalt | 80.0000 | 66.6667 | 100.0000 | 95.0000 | 4 | 2 | 4 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m1_e0 | homalt | 92.8571 | 86.6667 | 100.0000 | 91.0959 | 13 | 2 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e0 | homalt | 92.8571 | 86.6667 | 100.0000 | 92.0732 | 13 | 2 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l125_m2_e1 | homalt | 92.8571 | 86.6667 | 100.0000 | 92.3977 | 13 | 2 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m0_e0 | homalt | 66.6667 | 50.0000 | 100.0000 | 96.8254 | 2 | 2 | 2 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 92.1053 | 3 | 0 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m1_e0 | homalt | 83.3333 | 71.4286 | 100.0000 | 95.6140 | 5 | 2 | 5 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 93.3333 | 3 | 0 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e0 | homalt | 83.3333 | 71.4286 | 100.0000 | 96.1832 | 5 | 2 | 5 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 93.7500 | 3 | 0 | 3 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l150_m2_e1 | homalt | 85.7143 | 75.0000 | 100.0000 | 95.6522 | 6 | 2 | 6 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m1_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 98.5294 | 1 | 2 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m2_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m2_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 98.6486 | 1 | 2 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m2_e1 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | map_l250_m2_e1 | homalt | 50.0000 | 33.3333 | 100.0000 | 98.7179 | 1 | 2 | 1 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | map_siren | homalt | 97.1429 | 94.4444 | 100.0000 | 81.5618 | 85 | 5 | 85 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | segdup | hetalt | 98.8764 | 97.7778 | 100.0000 | 89.4231 | 44 | 1 | 44 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | segdup | homalt | 97.8261 | 95.7447 | 100.0000 | 90.7025 | 45 | 2 | 45 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | segdupwithalt | * | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | segdupwithalt | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | segdupwithalt | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | segdupwithalt | homalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| rpoplin-dv42 | INDEL | I6_15 | tech_badpromoters | * | 100.0000 | 100.0000 | 100.0000 | 56.6667 | 13 | 0 | 13 | 0 | 0 | ||
| rpoplin-dv42 | INDEL | I6_15 | tech_badpromoters | het | 100.0000 | 100.0000 | 100.0000 | 56.2500 | 7 | 0 | 7 | 0 | 0 | ||