PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
78951-79000 / 86044 show all
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.9248
99.8496
100.0000
40.4484
13282132800
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
64.8649
1301300
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
rpoplin-dv42INDELD1_5map_l100_m0_e0hetalt
96.2963
92.8571
100.0000
95.4064
1311300
rpoplin-dv42INDELD1_5map_l100_m1_e0hetalt
97.8261
95.7447
100.0000
92.0635
4524500
rpoplin-dv42INDELD1_5map_l100_m2_e0hetalt
97.8723
95.8333
100.0000
92.3205
4624600
rpoplin-dv42INDELD1_5map_l100_m2_e1hetalt
98.0000
96.0784
100.0000
92.0195
4924900
rpoplin-dv42INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
98.5714
30300
rpoplin-dv42INDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
96.8668
1211200
rpoplin-dv42INDELD1_5map_l125_m2_e0hetalt
96.5517
93.3333
100.0000
96.6903
1411400
rpoplin-dv42INDELD1_5map_l125_m2_e1hetalt
96.5517
93.3333
100.0000
96.7742
1411400
rpoplin-dv42INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.8304
20200
rpoplin-dv42INDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
98.1538
61600
rpoplin-dv42INDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
98.3333
61600
rpoplin-dv42INDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
98.1081
71700
rpoplin-dv42INDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.5075
30300
rpoplin-dv42INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.7179
30300
rpoplin-dv42INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7448
30300
rpoplin-dv42INDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.9645
5025000
rpoplin-dv42INDELD1_5segduphomalt
99.7207
99.4429
100.0000
94.4210
357235700
rpoplin-dv42INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9937
10100
rpoplin-dv42INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9898
10100
rpoplin-dv42INDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
44.1176
1901900
rpoplin-dv42INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
42.8571
80800
rpoplin-dv42INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
rpoplin-dv42INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
90900
rpoplin-dv42INDELD6_15decoy*
100.0000
100.0000
100.0000
99.9005
10100
rpoplin-dv42INDELD6_15decoyhet
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
98.9474
10100
rpoplin-dv42INDELD6_15decoyhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
rpoplin-dv42INDELD6_15func_cdshomalt
90.9091
83.3333
100.0000
60.0000
1021000
rpoplin-dv42INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
66.6667
50.0000
100.0000
95.6522
11100
rpoplin-dv42INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
56.6265
3633600
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
97.6190
95.3488
100.0000
77.2222
4124100
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
66.6667
50.0000
100.0000
94.1176
11100
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
rpoplin-dv42INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
01000
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.5920
7407400
rpoplin-dv42INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
94.1176
88.8889
100.0000
98.5294
81800