PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76751-76800 / 86044 show all
mlin-fermikitSNP*lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_11to50hetalt
100.0000
100.0000
100.0000
50.0000
50500
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNP*lowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
50.0000
100.0000
99.1453
11100
mlin-fermikitSNP*map_l100_m0_e0hetalt
31.5789
18.7500
100.0000
80.0000
313300
mlin-fermikitSNP*map_l100_m1_e0hetalt
56.1404
39.0244
100.0000
68.6275
16251600
mlin-fermikitSNP*map_l100_m2_e0hetalt
57.6271
40.4762
100.0000
71.6667
17251700
mlin-fermikitSNP*map_l100_m2_e1hetalt
59.0164
41.8605
100.0000
70.9677
18251800
mlin-fermikitSNP*map_l125_m0_e0hetalt
0.0000
100.0000
09000
mlin-fermikitSNP*map_l125_m1_e0hetalt
46.1538
30.0000
100.0000
68.9655
921900
mlin-fermikitSNP*map_l125_m2_e0hetalt
46.1538
30.0000
100.0000
76.3158
921900
mlin-fermikitSNP*map_l125_m2_e1hetalt
46.1538
30.0000
100.0000
76.9231
921900
mlin-fermikitSNP*map_l150_m0_e0hetalt
0.0000
100.0000
03000
mlin-fermikitSNP*map_l150_m1_e0hetalt
46.1538
30.0000
100.0000
68.4211
614600
mlin-fermikitSNP*map_l150_m2_e0hetalt
46.1538
30.0000
100.0000
73.9130
614600
mlin-fermikitSNP*map_l150_m2_e1hetalt
46.1538
30.0000
100.0000
75.0000
614600
mlin-fermikitSNP*map_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitSNP*map_l250_m1_e0hetalt
0.0000
100.0000
04000
mlin-fermikitSNP*map_l250_m2_e0hetalt
0.0000
100.0000
05000
mlin-fermikitSNP*map_l250_m2_e1hetalt
0.0000
100.0000
05000
mlin-fermikitSNP*map_sirenhetalt
72.4409
56.7901
100.0000
65.9259
46354600
mlin-fermikitSNP*segduphetalt
100.0000
100.0000
100.0000
92.8571
70700
mlin-fermikitSNP*segdupwithalt*
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthet
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitSNP*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtiHG002compoundhethetalt
97.2493
94.6459
100.0000
20.8092
5483154800
mlin-fermikitSNPtidecoy*
0.0000
100.0000
00000
mlin-fermikitSNPtidecoyhet
0.0000
100.0000
00000
mlin-fermikitSNPtidecoyhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtidecoyhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
38.4615
80800
mlin-fermikitSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
79.3103
60600
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
95.6522
91.6667
100.0000
81.6667
1111100
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
mlin-fermikitSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000