PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
76401-76450 / 86044 show all
mlin-fermikitINDEL*lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
mlin-fermikitINDEL*lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
mlin-fermikitINDEL*lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
mlin-fermikitINDEL*lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDEL*lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
mlin-fermikitINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
mlin-fermikitINDEL*map_l250_m1_e0hetalt
66.6667
50.0000
100.0000
94.2308
33300
mlin-fermikitINDEL*map_l250_m2_e0hetalt
66.6667
50.0000
100.0000
96.0000
33300
mlin-fermikitINDEL*map_l250_m2_e1hetalt
66.6667
50.0000
100.0000
96.2025
33300
mlin-fermikitINDEL*segduphetalt
80.1843
66.9231
100.0000
93.8999
87438900
mlin-fermikitINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9959
10100
mlin-fermikitINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9929
10100
mlin-fermikitINDEL*segdupwithalthetalt
0.0000
100.0000
00000
mlin-fermikitINDEL*segdupwithalthomalt
0.0000
100.0000
00000
mlin-fermikitINDEL*tech_badpromotershetalt
85.7143
75.0000
100.0000
50.0000
31300
mlin-fermikitINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000
mlin-fermikitINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
0.0000
0.0000
00000