PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
75951-76000 / 86044 show all
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_51to200homalt
66.6667
50.0000
100.0000
95.6522
11100
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtimap_l125_m0_e0hetalt
85.7143
75.0000
100.0000
83.7838
62600
ndellapenna-hhgaSNPtimap_l125_m1_e0hetalt
90.9091
83.3333
100.0000
75.9036
2042000
ndellapenna-hhgaSNPtimap_l125_m2_e0hetalt
90.9091
83.3333
100.0000
80.0000
2042000
ndellapenna-hhgaSNPtimap_l125_m2_e1hetalt
90.9091
83.3333
100.0000
80.1980
2042000
ndellapenna-hhgaSNPtimap_l150_m0_e0hetalt
100.0000
100.0000
100.0000
90.3226
30300
ndellapenna-hhgaSNPtimap_l150_m1_e0hetalt
88.8889
80.0000
100.0000
81.2500
1231200
ndellapenna-hhgaSNPtimap_l150_m2_e0hetalt
88.8889
80.0000
100.0000
84.4156
1231200
ndellapenna-hhgaSNPtimap_l150_m2_e1hetalt
88.8889
80.0000
100.0000
84.6154
1231200
ndellapenna-hhgaSNPtimap_l250_m0_e0hetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtimap_l250_m1_e0hetalt
66.6667
50.0000
100.0000
93.1034
22200
ltrigg-rtg2INDELI16_PLUSmap_l250_m2_e0hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSmap_l250_m2_e0homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSmap_l250_m2_e1hetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSmap_sirenhetalt
76.9231
62.5000
100.0000
83.3333
1061000
ltrigg-rtg2INDELI16_PLUSsegdup*
95.5556
91.4894
100.0000
89.7375
4344300
ltrigg-rtg2INDELI16_PLUSsegduphet
95.6522
91.6667
100.0000
88.0208
2222300
ltrigg-rtg2INDELI16_PLUSsegduphetalt
85.7143
75.0000
100.0000
97.1698
31300
ltrigg-rtg2INDELI16_PLUSsegduphomalt
97.2973
94.7368
100.0000
85.9504
1811700
ltrigg-rtg2INDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
55.5556
40400
ltrigg-rtg2INDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
20200
ltrigg-rtg2INDELI1_5decoy*
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5decoyhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5decoyhetalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5decoyhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
75.0000
20200
ltrigg-rtg2INDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
24.6835
119011900
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
97.6492
95.4064
100.0000
61.3043
2701326700
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9003
10100
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7500
10100
ltrigg-rtg2INDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.4772
97.0000
100.0000
56.4626
194619200
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8994
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.7179
10100
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.4742
98.9540
100.0000
69.2510
473546800
ltrigg-rtg2INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
99.1597
98.3333
100.0000
88.4157
5916800