PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
75901-75950 / 86044 show all
ndellapenna-hhgaSNP*segdupwithalthomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtiHG002compoundhethetalt
99.3043
98.6183
100.0000
23.0458
571857100
ndellapenna-hhgaSNPtidecoy*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtidecoyhet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtidecoyhetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtidecoyhomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtifunc_cdshetalt
100.0000
100.0000
100.0000
57.8947
80800
ndellapenna-hhgaSNPtifunc_cdshomalt
99.9810
99.9621
100.0000
20.8377
52732527300
ndellapenna-hhgaSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
100.0000
100.0000
100.0000
90.0000
1201200
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.9113
99.8227
100.0000
54.1531
11262112600
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
10100
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
66.6667
10100
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
85.7143
10100
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
80.0000
10100
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.7368
20200
ndellapenna-hhgaSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
100.0000
100.0000
100.0000
90.0000
1201200
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
100.0000
100.0000
100.0000
91.6667
10100
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_diTR_51to200homalt
90.9091
83.3333
100.0000
95.2830
51500
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
81.8182
20200
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_quadTR_51to200homalt
85.2459
74.2857
100.0000
90.4762
2692600
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_11to50hetalt
100.0000
100.0000
100.0000
66.6667
10100
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_51to200*
85.7143
75.0000
100.0000
95.4545
62500
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_51to200het
90.9091
83.3333
100.0000
95.4023
51400
ndellapenna-hhgaSNPtilowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000