PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
75751-75800 / 86044 show all
ndellapenna-hhgaINDELI6_15decoyhomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15func_cds*
98.8235
97.6744
100.0000
38.2353
4214200
ndellapenna-hhgaINDELI6_15func_cdshet
100.0000
100.0000
100.0000
40.0000
2402400
ndellapenna-hhgaINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
0.0000
31300
ndellapenna-hhgaINDELI6_15func_cdshomalt
100.0000
100.0000
100.0000
40.0000
1501500
ndellapenna-hhgaINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
55.5556
100.0000
54000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
95.2381
90.9091
100.0000
74.1722
4043900
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
66.6667
50.0000
100.0000
99.9118
11100
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
66.6667
50.0000
100.0000
99.6198
11100
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_51to200*
96.0000
92.3077
100.0000
58.6207
1211200
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_51to200het
100.0000
100.0000
10000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
95.6522
91.6667
100.0000
29.4118
1111200
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELI6_15map_l100_m0_e0hetalt
85.7143
75.0000
100.0000
92.5000
31300
ndellapenna-hhgaINDELI6_15map_l100_m0_e0homalt
95.6522
91.6667
100.0000
87.3563
1111100
ndellapenna-hhgaINDELI6_15map_l100_m1_e0hetalt
95.2381
90.9091
100.0000
83.7398
2022000
ndellapenna-hhgaINDELI6_15map_l100_m1_e0homalt
95.2381
90.9091
100.0000
85.5072
3033000
ndellapenna-hhgaINDELI6_15map_l100_m2_e0hetalt
95.2381
90.9091
100.0000
85.6115
2022000
ndellapenna-hhgaINDELI6_15map_l100_m2_e0homalt
95.2381
90.9091
100.0000
87.0130
3033000
ndellapenna-hhgaINDELI6_15map_l100_m2_e1homalt
95.2381
90.9091
100.0000
87.2881
3033000
ndellapenna-hhgaINDELI6_15map_l125_m0_e0hetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELI6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
90.0000
60600
ndellapenna-hhgaINDELI6_15map_l125_m1_e0hetalt
93.3333
87.5000
100.0000
88.8889
71700