PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7401-7450 / 86044 show all
gduggal-snapfbINDELD6_15map_l150_m0_e0*
78.8060
68.7500
92.3077
91.5309
22102422
100.0000
gduggal-snapfbINDELD6_15map_l150_m0_e0het
77.1875
65.0000
95.0000
85.9155
1371911
100.0000
gduggal-snapfbINDELD6_15map_l150_m0_e0homalt
76.9231
71.4286
83.3333
96.2264
52511
100.0000
gduggal-snapfbINDELD6_15map_l150_m1_e0homalt
78.2609
69.2308
90.0000
92.1569
1881822
100.0000
gduggal-snapfbINDELD6_15map_l150_m2_e0homalt
80.0000
71.4286
90.9091
92.0000
2082022
100.0000
gduggal-snapfbINDELD6_15map_l150_m2_e1homalt
80.7692
72.4138
91.3043
91.7563
2182122
100.0000
gduggal-snapfbINDELD6_15map_l250_m1_e0*
62.0690
50.0000
81.8182
96.2199
99922
100.0000
gduggal-snapfbINDELD6_15map_l250_m1_e0het
66.6667
54.5455
85.7143
94.4444
65611
100.0000
gduggal-snapfbINDELD6_15map_l250_m1_e0homalt
66.6667
60.0000
75.0000
97.4684
32311
100.0000
gduggal-snapfbINDELD6_15map_l250_m2_e0*
62.8571
50.0000
84.6154
96.0366
11111122
100.0000
gduggal-snapfbINDELD6_15map_l250_m2_e0het
69.5652
57.1429
88.8889
93.8356
86811
100.0000
gduggal-snapfbINDELD6_15map_l250_m2_e0homalt
60.0000
50.0000
75.0000
97.7143
33311
100.0000
gduggal-snapfbINDELD6_15map_l250_m2_e1*
62.8571
50.0000
84.6154
96.0961
11111122
100.0000
gduggal-snapfbINDELD6_15map_l250_m2_e1het
69.5652
57.1429
88.8889
93.9189
86811
100.0000
gduggal-snapfbINDELD6_15map_l250_m2_e1homalt
60.0000
50.0000
75.0000
97.7401
33311
100.0000
gduggal-snapfbINDELD6_15map_sirenhetalt
64.3533
51.5152
85.7143
76.2712
51481222
100.0000
gduggal-snapfbINDELD6_15segdup*
84.6900
76.4398
94.9367
90.2107
1464515088
100.0000
gduggal-snapfbINDELD6_15segduphet
82.4566
71.7391
96.9388
89.5075
66269533
100.0000
gduggal-snapfbINDELD6_15segduphomalt
91.1852
92.0000
90.3846
91.3333
4644755
100.0000
gduggal-snapfbINDELD6_15tech_badpromoters*
66.6667
52.9412
90.0000
54.5455
98911
100.0000
gduggal-snapfbINDELD6_15tech_badpromotershomalt
83.3333
83.3333
83.3333
45.4545
51511
100.0000
gduggal-snapfbINDELI1_5func_cdshetalt
0.0000
100.0000
0.0000
66.6667
20011
100.0000
gduggal-snapfbINDELI1_5map_l150_m0_e0hetalt
80.0000
100.0000
66.6667
96.5517
30211
100.0000
gduggal-snapfbINDELI1_5map_l150_m0_e0homalt
97.7329
97.0149
98.4615
94.4869
6526411
100.0000
gduggal-snapfbINDELI1_5map_l150_m1_e0hetalt
88.1890
88.8889
87.5000
95.9391
81711
100.0000
gduggal-snapfbINDELI1_5map_l150_m2_e0hetalt
88.1890
88.8889
87.5000
96.5217
81711
100.0000
gduggal-snapfbINDELI1_5map_l150_m2_e1hetalt
89.4410
90.0000
88.8889
96.1373
91811
100.0000
gduggal-snapfbINDELI1_5map_l250_m0_e0*
93.6170
91.6667
95.6522
98.2642
2222211
100.0000
gduggal-snapfbINDELI1_5map_l250_m0_e0het
93.3333
93.3333
93.3333
97.4315
1411411
100.0000
gduggal-snapfbINDELI6_15HG002compoundhethomalt
3.2572
38.7097
1.7002
37.4879
121911636636
100.0000
gduggal-snapfbINDELI6_15func_cds*
74.3590
67.4419
82.8571
33.9623
29142966
100.0000
gduggal-snapfbINDELI6_15func_cdshet
77.0270
75.0000
79.1667
35.1351
1861955
100.0000
gduggal-snapfbINDELI6_15func_cdshetalt
50.0000
50.0000
50.0000
33.3333
22111
100.0000
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
35.4132
25.4237
58.3333
64.1791
1544141010
100.0000
gduggal-snapfbINDELI6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
61.2790
48.5452
83.0688
66.6372
3173363146464
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
44.0000
30.5556
78.5714
62.1622
11251133
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
54.9618
39.1304
92.3077
70.6767
36563633
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
60.0000
44.1176
93.7500
72.6496
30383022
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
41.1854
27.9851
77.9570
49.7297
1503861454141
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
40.9756
28.1879
75.0000
50.6849
42107812727
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
43.4297
28.6501
89.7059
44.7154
1042596177
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
21.4286
16.6667
30.0000
64.2857
420377
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
60.8920
54.0284
69.7531
54.6218
114971134949
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
64.7059
58.5106
72.3684
53.7994
110781104242
100.0000
gduggal-snapfbINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
59.1477
49.1961
74.1463
60.0390
1531581525353
100.0000
gduggal-snapfbINDELI6_15lowcmp_SimpleRepeat_diTR_11to50homalt
47.6817
34.6405
76.4706
72.3577
53100521616
100.0000
gduggal-snapfbINDELI6_15lowcmp_SimpleRepeat_diTR_51to200*
22.8571
13.0435
92.3077
56.6667
12801211
100.0000
gduggal-snapfbINDELI6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
25.0000
14.4578
92.3077
18.7500
12711211
100.0000
gduggal-snapfbINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
47.8632
36.3636
70.0000
84.6154
1628733
100.0000
gduggal-snapfbINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
86.3158
83.6735
89.1304
77.9904
4184155
100.0000