PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
74301-74350 / 86044 show all
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3971
98.8014
100.0000
18.5915
577757800
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
22.5000
9349300
ckim-gatkINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
ckim-gatkINDELD6_15map_l100_m0_e0hetalt
97.2973
94.7368
100.0000
83.3333
1811800
ckim-gatkINDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
90.6883
2312300
ckim-gatkINDELD6_15map_l100_m1_e0hetalt
96.1832
92.6471
100.0000
73.9669
6356300
ckim-gatkINDELD6_15map_l100_m1_e0homalt
98.4127
96.8750
100.0000
86.9748
6226200
ckim-gatkINDELD6_15map_l100_m2_e0hetalt
96.1832
92.6471
100.0000
75.2941
6356300
ckim-gatkINDELD6_15map_l100_m2_e0homalt
98.4375
96.9231
100.0000
87.4251
6326300
ckim-gatkINDELD6_15map_l100_m2_e1hetalt
95.7143
91.7808
100.0000
75.0929
6766700
ckim-gatkINDELD6_15map_l100_m2_e1homalt
98.4848
97.0149
100.0000
87.3294
6526500
ckim-gatkINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.9091
60600
ckim-gatkINDELD6_15map_l125_m0_e0homalt
100.0000
100.0000
100.0000
93.1429
1201200
ckim-gatkINDELD6_15map_l125_m1_e0hetalt
97.2973
94.7368
100.0000
86.2595
1811800
ckim-gatkINDELD6_15map_l125_m1_e0homalt
98.5075
97.0588
100.0000
89.5899
3313300
ckim-gatkINDELD6_15map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
87.6712
1811800
ckim-gatkINDELD6_15map_l125_m2_e0homalt
98.5915
97.2222
100.0000
89.6450
3513500
ckim-gatkINDELD6_15map_l125_m2_e1hetalt
94.7368
90.0000
100.0000
88.0000
1821800
ckim-gatkINDELD6_15map_l125_m2_e1homalt
98.6301
97.2973
100.0000
89.5652
3613600
ckim-gatkINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
91.2281
50500
ckim-gatkINDELD6_15map_l150_m0_e0homalt
100.0000
100.0000
100.0000
95.0704
70700
ckim-gatkINDELD6_15map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
91.8367
80800
ckim-gatkINDELD6_15map_l150_m1_e0homalt
98.0392
96.1538
100.0000
90.0398
2512500
ckim-gatkINDELD6_15map_l150_m2_e0hetalt
100.0000
100.0000
100.0000
92.7928
80800
ckim-gatkINDELD6_15map_l150_m2_e0homalt
98.1818
96.4286
100.0000
90.2527
2712700
ckim-gatkINDELD6_15map_l150_m2_e1hetalt
94.1176
88.8889
100.0000
92.9825
81800
ckim-gatkINDELD6_15map_l150_m2_e1homalt
98.2456
96.5517
100.0000
90.0356
2812800
ckim-gatkINDELD6_15map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-gatkINDELD6_15map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.4684
20200
ckim-gatkINDELD6_15map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
96.6667
20200
ckim-gatkINDELD6_15map_l250_m1_e0homalt
100.0000
100.0000
100.0000
96.5035
50500
ckim-gatkINDELD6_15map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.2973
20200
ckim-gatkINDELD6_15map_l250_m2_e0homalt
100.0000
100.0000
100.0000
96.3190
60600
ckim-gatkINDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.3333
20200
ckim-gatkINDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
96.3855
60600
ckim-gatkINDELD6_15map_sirenhetalt
96.8750
93.9394
100.0000
75.7180
9369300
ckim-gatkINDELD6_15segduphetalt
94.6237
89.7959
100.0000
90.4968
4454400
ckim-gatkINDELD6_15segdupwithalt*
0.0000
100.0000
00000
ckim-gatkINDELD6_15segdupwithalthet
0.0000
100.0000
00000
ckim-gatkINDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
ckim-gatkINDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
ckim-gatkINDELD6_15tech_badpromoters*
100.0000
100.0000
100.0000
51.4286
1701700
ckim-gatkINDELD6_15tech_badpromotershet
100.0000
100.0000
100.0000
52.3810
1001000
ckim-gatkINDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
ckim-gatkINDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
53.8462
60600
ckim-gatkINDELI16_PLUSHG002complexvarhet
99.4709
98.9474
100.0000
64.5414
658763400
ckim-gatkINDELI16_PLUSdecoy*
0.0000
100.0000
00000
ckim-gatkINDELI16_PLUSdecoyhet
0.0000
100.0000
00000