PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
71601-71650 / 86044 show all
ckim-isaacINDEL*map_l150_m2_e1hetalt
78.9474
65.2174
100.0000
95.5414
1581400
ckim-isaacINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
ckim-isaacINDEL*map_l250_m0_e0homalt
57.1429
40.0000
100.0000
96.3235
10151000
ckim-isaacINDEL*map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
98.6667
42200
ckim-isaacINDEL*map_l250_m1_e0homalt
57.5163
40.3670
100.0000
93.4621
44654400
ckim-isaacINDEL*map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
98.9011
42200
ckim-isaacINDEL*map_l250_m2_e0homalt
58.0247
40.8696
100.0000
94.2543
47684700
ckim-isaacINDEL*map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
98.9529
42200
ckim-isaacINDEL*map_l250_m2_e1homalt
58.5366
41.3793
100.0000
94.3262
48684800
ckim-isaacINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9964
10100
ckim-isaacINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9949
10100
ckim-isaacINDEL*segdupwithalthetalt
0.0000
100.0000
00000
ckim-isaacINDEL*segdupwithalthomalt
0.0000
100.0000
00000
ckim-isaacINDEL*tech_badpromoters*
92.9577
86.8421
100.0000
48.4127
66106500
ckim-isaacINDEL*tech_badpromotershet
94.5946
89.7436
100.0000
48.4375
3543300
ckim-isaacINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
28.5714
40500
ckim-isaacINDEL*tech_badpromotershomalt
90.0000
81.8182
100.0000
50.9091
2762700
ckim-isaacINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
ckim-isaacINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000