PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
7001-7050 / 86044 show all
cchapple-customSNPtimap_l150_m2_e1homalt
98.1938
96.4643
99.9865
68.8251
7421272741811
100.0000
cchapple-customSNPtimap_l250_m0_e0homalt
97.8972
96.1009
99.7619
89.4393
4191741911
100.0000
cchapple-customSNPtimap_l250_m1_e0homalt
98.2278
96.5775
99.9356
83.5174
155255155111
100.0000
cchapple-customSNPtimap_l250_m2_e0homalt
98.1670
96.4551
99.9407
84.8332
168762168611
100.0000
cchapple-customSNPtimap_l250_m2_e1homalt
98.1620
96.4447
99.9415
84.8962
170963170811
100.0000
cchapple-customSNPtimap_sirenhomalt
99.1409
98.3094
99.9866
47.3567
372756413725855
100.0000
cchapple-customSNPtisegduphomalt
99.8600
99.8668
99.8533
87.0523
74951074871111
100.0000
cchapple-customSNPtvHG002compoundhethomalt
99.4506
98.9374
99.9692
37.6656
335236324611
100.0000
cchapple-customSNPtvlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
99.7125
99.6183
99.8069
55.4600
522251711
100.0000
cchapple-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331homalt
99.7596
99.5574
99.9627
68.6053
539924535322
100.0000
cchapple-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
99.1030
98.4221
99.7934
73.4358
499848311
100.0000
cchapple-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
99.1386
98.5075
99.7778
71.4829
462744911
100.0000
cchapple-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
99.6313
99.3324
99.9319
72.9366
148810146811
100.0000
cchapple-customSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhomalt
99.7596
99.5574
99.9627
68.6053
539924535322
100.0000
cchapple-customSNPtvlowcmp_SimpleRepeat_diTR_11to50homalt
99.7161
99.4907
99.9426
43.6105
17589174211
100.0000
cchapple-customSNPtvlowcmp_SimpleRepeat_quadTR_51to200homalt
81.6327
83.3333
80.0000
90.0000
51411
100.0000
cchapple-customSNPtvmap_sirenhomalt
99.0870
98.2019
99.9882
51.4688
169303101691522
100.0000
cchapple-customSNPtvsegduphomalt
99.8144
99.9074
99.7215
89.1707
32353322399
100.0000
cchapple-customSNPtvtech_badpromotershomalt
97.4021
97.4359
97.3684
49.3333
3813711
100.0000
ciseli-customINDEL*decoy*
77.7778
70.0000
87.5000
99.9456
73711
100.0000
ciseli-customINDEL*decoyhomalt
85.7143
100.0000
75.0000
99.9092
30311
100.0000
ciseli-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
87.5000
00022
100.0000
ciseli-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
75.0000
00011
100.0000
ciseli-customINDELC1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
0.0000
91.6667
00011
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_diTR_51to200homalt
67.6329
98.5915
51.4706
49.8155
701706666
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.1559
97.0803
99.2556
71.4387
3991240033
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.9214
99.9312
99.9116
54.3329
1017171016799
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.0896
98.3925
99.7967
32.3556
146924147333
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7545
99.7818
99.7273
51.7500
3658836571010
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.5768
95.8462
99.3711
22.4390
6232763244
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
97.9823
98.9848
97.0000
60.1594
195219466
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.5664
99.3506
99.7831
28.4161
459346011
100.0000
ckim-dragenINDELD1_5lowcmp_SimpleRepeat_triTR_51to200homalt
92.8571
100.0000
86.6667
60.5263
1301322
100.0000
ckim-dragenINDELD1_5map_l100_m0_e0homalt
98.4375
97.6744
99.2126
83.3878
252625222
100.0000
ckim-dragenINDELD1_5map_l100_m1_e0homalt
99.1508
98.6486
99.6581
83.0336
584858322
100.0000
ckim-dragenINDELD1_5map_l100_m2_e0homalt
99.1774
98.6907
99.6689
83.7284
603860222
100.0000
ckim-dragenINDELD1_5map_l100_m2_e1homalt
99.1894
98.7097
99.6737
83.7831
612861122
100.0000
ckim-dragenINDELD1_5map_l125_m0_e0homalt
97.6109
96.6216
98.6207
86.7338
143514322
100.0000
ckim-dragenINDELD1_5map_l125_m1_e0homalt
98.7005
97.9943
99.4169
85.1515
342734122
100.0000
ckim-dragenINDELD1_5map_l125_m2_e0homalt
98.7544
98.0769
99.4413
85.9828
357735622
100.0000
ckim-dragenINDELD1_5map_l125_m2_e1homalt
98.7814
98.1183
99.4536
85.9716
365736422
100.0000
ckim-dragenINDELD1_5map_l150_m0_e0homalt
98.2249
97.6471
98.8095
90.0238
8328311
100.0000
ckim-dragenINDELD1_5map_l150_m1_e0homalt
98.8953
98.2456
99.5536
87.4228
224422311
100.0000
ckim-dragenINDELD1_5map_l150_m2_e0homalt
98.9596
98.3471
99.5798
88.1000
238423711
100.0000
ckim-dragenINDELD1_5map_l150_m2_e1homalt
98.7838
98.3871
99.1837
88.0020
244424322
100.0000
ckim-dragenINDELD1_5map_l250_m1_e0homalt
97.3451
96.4912
98.2143
94.0426
5525511
100.0000
ckim-dragenINDELD1_5map_l250_m2_e0homalt
97.4790
96.6667
98.3051
94.5065
5825811
100.0000
ckim-dragenINDELD1_5map_l250_m2_e1homalt
97.4790
96.6667
98.3051
94.6266
5825811
100.0000
ckim-dragenINDELD1_5segduphomalt
99.8609
100.0000
99.7222
94.4853
359035911
100.0000
ckim-dragenINDELD6_15*hetalt
96.4645
93.5894
99.5217
32.8589
765052476993737
100.0000