PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
69551-69600 / 86044 show all
ckim-dragenINDELI1_5segdupwithalt*
0.0000
100.0000
00000
ckim-dragenINDELI1_5segdupwithalthet
0.0000
100.0000
00000
ckim-dragenINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
ckim-dragenINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
ckim-dragenINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
56.0000
2202200
ckim-dragenINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
50.0000
80800
ckim-dragenINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
ckim-dragenINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
59.3750
1301300
ckim-dragenINDELI6_15HG002complexvarhetalt
96.4437
93.1316
100.0000
55.3409
113984117900
ckim-dragenINDELI6_15decoy*
0.0000
100.0000
00000
ckim-dragenINDELI6_15decoyhet
0.0000
100.0000
00000
ckim-dragenINDELI6_15decoyhetalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15decoyhomalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15func_cdshet
100.0000
100.0000
100.0000
46.6667
2402400
ckim-dragenINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
25.0000
31300
ckim-dragenINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.0714
83.6066
100.0000
54.4643
51105100
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.2036
96.4706
100.0000
57.8680
8238300
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
72.0824
122012200
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.0392
96.1538
100.0000
59.8425
5025100
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
94.1691
88.9807
100.0000
46.6772
3234033700
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_diTR_51to200het
88.8889
100.0000
81000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.0228
98.0645
100.0000
82.9241
152315300
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
98.3607
96.7742
100.0000
86.8534
6026100
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.8506
97.7273
100.0000
74.7059
4314300
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
81.2977
4904900
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8634
20200
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.3464
20200
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.4152
96.8799
100.0000
43.4270
6212062400
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200*
96.9529
94.0860
100.0000
70.5882
1751117500
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200het
95.5224
91.4286
100.0000
90.8425
3232500
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.2789
94.7020
100.0000
48.0969
143815000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ckim-dragenINDELI6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000