PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
69301-69350 / 86044 show all
ckim-dragenINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
47.0588
90900
ckim-dragenINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9525
10100
ckim-dragenINDELD6_15decoyhet
0.0000
100.0000
00000
ckim-dragenINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0654
10100
ckim-dragenINDELD6_15decoyhomalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15func_cds*
98.8235
97.6744
100.0000
56.7010
4214200
ckim-dragenINDELD6_15func_cdshet
98.2456
96.5517
100.0000
54.8387
2812800
ckim-dragenINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
ckim-dragenINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
60.0000
1201200
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.2973
60600
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.9730
30300
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.4762
20200
ckim-dragenINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.1132
10100
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
56.6265
3633600
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.9899
40400
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5185
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
86.6667
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
91.3043
20200
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
92.3077
10100
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
75.0000
10100
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.6291
7407400
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10*
96.3636
92.9825
100.0000
99.5388
5345300
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10het
95.0000
90.4762
100.0000
99.3499
3843800
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1115
90900
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.8705
60600
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
98.4293
96.9072
100.0000
20.3390
9439400
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ckim-dragenINDELD6_15map_l100_m0_e0hetalt
94.4444
89.4737
100.0000
79.7619
1721700
ckim-dragenINDELD6_15map_l100_m0_e0homalt
95.6522
91.6667
100.0000
92.4138
2222200
ckim-dragenINDELD6_15map_l100_m1_e0hetalt
95.3846
91.1765
100.0000
69.7561
6266200
ckim-dragenINDELD6_15map_l100_m2_e0hetalt
95.3846
91.1765
100.0000
71.0280
6266200
ckim-dragenINDELD6_15map_l100_m2_e1hetalt
94.9640
90.4110
100.0000
70.9251
6676600
ckim-dragenINDELD6_15map_l125_m0_e0hetalt
90.9091
83.3333
100.0000
87.8049
51500
ckim-dragenINDELD6_15map_l125_m0_e0homalt
95.6522
91.6667
100.0000
94.7115
1111100
ckim-dragenINDELD6_15map_l125_m1_e0hetalt
94.4444
89.4737
100.0000
82.2917
1721700
ckim-dragenINDELD6_15map_l125_m2_e0hetalt
94.4444
89.4737
100.0000
84.5455
1721700
ckim-dragenINDELD6_15map_l125_m2_e1hetalt
91.8919
85.0000
100.0000
84.9558
1731700
ckim-dragenINDELD6_15map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
86.8421
50500
ckim-dragenINDELD6_15map_l150_m0_e0homalt
92.3077
85.7143
100.0000
96.4072
61600
ckim-dragenINDELD6_15map_l150_m1_e0hetalt
93.3333
87.5000
100.0000
89.2308
71700