PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
69151-69200 / 86044 show all
hfeng-pmm2INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
hfeng-pmm2INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
hfeng-pmm2INDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9355
40400
hfeng-pmm2INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9544
20200
hfeng-pmm2INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6479
10100
hfeng-pmm2INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9348
10100
hfeng-pmm2INDELD1_5func_cds*
100.0000
100.0000
100.0000
41.1765
159016000
hfeng-pmm2INDELD1_5func_cdshet
100.0000
100.0000
100.0000
47.2393
8508600
hfeng-pmm2INDELD1_5func_cdshetalt
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
30.1887
7407400
hfeng-pmm2INDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.1378
87.1570
100.0000
32.6259
1588234161900
hfeng-pmm2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
95.2381
90.9091
100.0000
98.8584
1011000
hfeng-pmm2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
93.3333
87.5000
100.0000
98.7544
71700
hfeng-pmm2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.4359
10100
hfeng-pmm2INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2727
20200
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.3386
84.0580
100.0000
56.0606
58115800
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.6109
99.2248
100.0000
61.7910
256225600
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.7893
1001000
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.6692
70700
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.0588
10100
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.2481
20200
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.9310
95.9459
100.0000
81.4136
7137100
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.9083
99.8168
100.0000
76.4680
545154500
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.5274
99.0593
100.0000
79.9199
105310105300
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.3103
98.6301
100.0000
78.6632
648964800
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.6301
97.2973
100.0000
87.8788
3613600
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
80.6806
369036900
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
93.0849
87.0643
100.0000
31.6290
1124167115000
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
01000
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
80.8252
67.8208
100.0000
29.8419
33315835500
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.8930
97.8102
100.0000
71.3267
402940200
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9991
10100
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9921
10100
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.8482
97.7227
100.0000
32.9973
145934146200
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.6378
95.3846
100.0000
23.5079
6203062800
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000