PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
67701-67750 / 86044 show all
hfeng-pmm2INDELD6_15map_l250_m2_e1*
100.0000
100.0000
100.0000
96.4401
2202200
hfeng-pmm2INDELD6_15map_l250_m2_e1het
100.0000
100.0000
100.0000
96.7366
1401400
hfeng-pmm2INDELD6_15map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
96.6667
20200
hfeng-pmm2INDELD6_15map_l250_m2_e1homalt
100.0000
100.0000
100.0000
95.3488
60600
hfeng-pmm2INDELD6_15map_sirenhetalt
96.3351
92.9293
100.0000
76.4706
9279200
hfeng-pmm2INDELD6_15segduphetalt
93.4783
87.7551
100.0000
90.6318
4364300
hfeng-pmm2INDELD6_15segdupwithalt*
0.0000
100.0000
00000
hfeng-pmm2INDELD6_15segdupwithalthet
0.0000
100.0000
00000
hfeng-pmm2INDELD6_15segdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm2INDELD6_15segdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm2INDELD6_15tech_badpromoters*
93.7500
88.2353
100.0000
50.0000
1521500
hfeng-pmm2INDELD6_15tech_badpromotershet
88.8889
80.0000
100.0000
52.9412
82800
hfeng-pmm2INDELD6_15tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
10100
hfeng-pmm2INDELD6_15tech_badpromotershomalt
100.0000
100.0000
100.0000
50.0000
60600
hfeng-pmm2INDELI16_PLUSHG002complexvarhet
98.8593
97.7444
100.0000
63.5519
6501562800
hfeng-pmm2INDELI16_PLUSdecoy*
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSdecoyhet
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSdecoyhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSdecoyhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSfunc_cds*
95.6522
91.6667
100.0000
74.4186
1111100
hfeng-pmm2INDELI16_PLUSfunc_cdshet
100.0000
100.0000
100.0000
59.0909
90900
hfeng-pmm2INDELI16_PLUSfunc_cdshetalt
0.0000
100.0000
01000
hfeng-pmm2INDELI16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
89.4737
20200
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
94.4785
89.5349
100.0000
78.2152
7798300
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
1802000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
99.1501
98.3146
100.0000
80.6416
175317500
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
99.0654
98.1481
100.0000
79.5276
106210400
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
76.7296
3503700
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
98.5507
97.1429
100.0000
85.6540
3413400
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
100.0000
100.0000
100.0000
75.0700
8908900
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
74.1463
5305300
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
66.6667
2002000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
82.6087
1601600
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.7273
86.4407
100.0000
73.9130
5185400
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
100.0000
85.7143
02100
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELI16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000