PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
65201-65250 / 86044 show all
hfeng-pmm1INDELD16_PLUSsegdupwithalthet
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm1INDELD16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
33.3333
40400
hfeng-pmm1INDELD16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
0.0000
40400
hfeng-pmm1INDELD16_PLUStech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD16_PLUStech_badpromotershomalt
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5decoy*
100.0000
100.0000
100.0000
99.9303
40400
hfeng-pmm1INDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9489
20200
hfeng-pmm1INDELD1_5decoyhetalt
100.0000
100.0000
100.0000
99.6479
10100
hfeng-pmm1INDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9352
10100
hfeng-pmm1INDELD1_5func_cdshetalt
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5func_cdshomalt
100.0000
100.0000
100.0000
27.4510
7407400
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.1692
87.2119
100.0000
32.0201
1589233162200
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
95.2381
90.9091
100.0000
98.8453
1011000
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
93.3333
87.5000
100.0000
98.6460
71700
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.4359
10100
hfeng-pmm1INDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3548
20200
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.1875
85.5072
100.0000
56.6176
59105900
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.6109
99.2248
100.0000
61.6192
256225600
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
98.7849
1001000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.5597
70700
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.0588
10100
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.3399
20200
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.6301
97.2973
100.0000
81.3953
7227200
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
99.8165
99.6337
100.0000
76.1717
544254400
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
99.5749
99.1533
100.0000
79.4702
10549105400
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.4644
98.9346
100.0000
77.9885
650765000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
98.6301
97.2973
100.0000
88.0399
3613600
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
99.8643
99.7290
100.0000
80.4255
368136800
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.9963
86.9094
100.0000
30.8479
1122169115000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
01000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
79.5092
65.9878
100.0000
28.6008
32416734700
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
99.1411
98.2968
100.0000
71.4386
404740500
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9990
10100
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9922
10100
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.2238
98.4595
100.0000
33.1973
147023147300
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
98.0392
96.1538
100.0000
23.3374
6252563400
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm1INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000