PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
64751-64800 / 86044 show all
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
41.0461
13300133000
jlack-gatkINDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
92.3077
85.7143
100.0000
25.0000
4274200
jlack-gatkINDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
93.7500
1221200
jlack-gatkINDELD1_5map_l100_m1_e0hetalt
93.1818
87.2340
100.0000
90.9492
4164100
jlack-gatkINDELD1_5map_l100_m2_e0hetalt
93.3333
87.5000
100.0000
91.3402
4264200
jlack-gatkINDELD1_5map_l100_m2_e1hetalt
92.6316
86.2745
100.0000
91.1290
4474400
jlack-gatkINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.7099
30300
jlack-gatkINDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
95.9044
1211200
jlack-gatkINDELD1_5map_l125_m2_e0hetalt
92.8571
86.6667
100.0000
96.0606
1321300
jlack-gatkINDELD1_5map_l125_m2_e1hetalt
92.8571
86.6667
100.0000
96.1194
1321300
jlack-gatkINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
98.0583
20200
jlack-gatkINDELD1_5map_l150_m0_e0homalt
98.8095
97.6471
100.0000
89.8904
8328300
jlack-gatkINDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.4895
61600
jlack-gatkINDELD1_5map_l150_m1_e0homalt
99.1150
98.2456
100.0000
86.7690
224422400
jlack-gatkINDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.7612
61600
jlack-gatkINDELD1_5map_l150_m2_e0homalt
99.1667
98.3471
100.0000
87.4803
238423800
jlack-gatkINDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.4359
71700
jlack-gatkINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
97.0721
1301300
jlack-gatkINDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.7273
30300
jlack-gatkINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
93.7916
5615600
jlack-gatkINDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.1132
30300
jlack-gatkINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
94.2774
5915900
jlack-gatkINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.1707
30300
jlack-gatkINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
94.4497
5915900
jlack-gatkINDELD1_5map_sirenhetalt
95.0000
90.4762
100.0000
90.7543
7687600
jlack-gatkINDELD1_5segduphetalt
97.0297
94.2308
100.0000
95.7018
4934900
jlack-gatkINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9959
10100
jlack-gatkINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9946
10100
jlack-gatkINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
jlack-gatkINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
jlack-gatkINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
jlack-gatkINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1736
10100
jlack-gatkINDELD6_15decoyhomalt
0.0000
100.0000
00000
jlack-gatkINDELD6_15func_cds*
100.0000
100.0000
100.0000
57.8431
4304300
jlack-gatkINDELD6_15func_cdshet
100.0000
100.0000
100.0000
57.3529
2902900
jlack-gatkINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
jlack-gatkINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
58.6207
1201200
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.0588
60600
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8417
30300
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
jlack-gatkINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.7778
10100
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
91.6667
84.6154
100.0000
58.7500
3363300
jlack-gatkINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.7401
40400