PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
64651-64700 / 86044 show all
jlack-gatkINDELC6_15map_l250_m1_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m1_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e0homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_siren*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdup*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segduphet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segduphomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalt*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalthet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15segdupwithalthomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.5617
60600
jlack-gatkINDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.6451
40400
jlack-gatkINDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
jlack-gatkINDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
99.0654
20200
jlack-gatkINDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
69.2308
40400
jlack-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
85.7143
75.0000
100.0000
99.5995
31300
jlack-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8224
10100
jlack-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
jlack-gatkINDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.4152
11100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.0000
81.8182
100.0000
85.5422
921200
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
85.7143
75.0000
100.0000
99.5890
31300
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.8172
10100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
10100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
66.6667
50.0000
100.0000
99.4118
11100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
94.4444
89.4737
100.0000
72.3684
1722100
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
90.9091
83.3333
100.0000
42.8571
1021200
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000