PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
64301-64350 / 86044 show all
hfeng-pmm3INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
52.9412
80800
hfeng-pmm3INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
hfeng-pmm3INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
hfeng-pmm3INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8900
10100
hfeng-pmm3INDELD6_15decoyhet
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1150
10100
hfeng-pmm3INDELD6_15decoyhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15func_cds*
98.8235
97.6744
100.0000
51.7241
4214200
hfeng-pmm3INDELD6_15func_cdshet
98.2456
96.5517
100.0000
48.1481
2812800
hfeng-pmm3INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm3INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
57.1429
1201200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.7213
60600
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.5207
30300
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.6190
10100
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.1408
82.0513
100.0000
61.4458
3273200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8235
97.6744
100.0000
76.5363
4214200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.5155
40400
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.1651
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
84.6154
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
97.1963
94.5455
100.0000
63.9456
5235300
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.8750
93.9394
100.0000
63.6364
3123200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
90.9091
20200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
91.6667
10100
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.2424
98.4962
100.0000
80.9731
262426200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.0228
98.0645
100.0000
82.9596
152315200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.6301
97.2973
100.0000
63.2653
3613600
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
80.8786
7407400
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.1045
90900
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
99.1468
98.3080
100.0000
27.7467
116220116400
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.4836
98.9726
100.0000
18.6798
578657900
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.8870
99.7743
100.0000
32.1045
442144200
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
23.1405
9349300
hfeng-pmm3INDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
30.0000
2102100
hfeng-pmm3INDELD6_15map_l100_m0_e0hetalt
94.4444
89.4737
100.0000
81.5217
1721700
hfeng-pmm3INDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
87.8307
2312300
hfeng-pmm3INDELD6_15map_l100_m1_e0hetalt
94.5736
89.7059
100.0000
71.7593
6176100
hfeng-pmm3INDELD6_15map_l100_m1_e0homalt
98.4127
96.8750
100.0000
83.3333
6226200
hfeng-pmm3INDELD6_15map_l100_m2_e0hetalt
94.5736
89.7059
100.0000
73.5931
6176100