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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 123 124 125 126 127 128 129 130 131 ... 1720 1721 » 6301-6350 / 86044 show all
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8557	100.0000	99.7118	79.2216	346	0	346	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	89.6552	95.1220	84.7826	76.1039	78	4	78	14	14	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.1468	92.6189	99.9541	23.6736	4304	343	4357	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	homalt	97.3424	98.7673	95.9581	68.3562	641	8	641	27	27	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.8132	93.8694	99.9475	22.1609	3782	247	3809	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	98.5230	99.2995	97.7586	67.1946	567	4	567	13	13	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.0708	92.4769	99.9552	27.1601	4413	359	4466	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	homalt	98.2353	99.2360	97.2546	73.3953	1169	9	1169	33	33	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.1713	92.6560	99.9638	35.0529	5463	433	5525	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	homalt	99.0984	99.3619	98.8363	71.4448	3737	24	3737	44	44	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	96.2944	92.8778	99.9719	25.4138	3534	271	3559	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_11to50	homalt	99.5587	100.0000	99.1213	72.8401	564	0	564	5	5	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	76.3320	62.0112	99.2537	24.2938	111	68	133	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	93.9805	88.9241	99.6466	70.1162	281	35	282	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.8968	100.0000	99.7938	64.2989	968	0	968	2	2	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.4398	100.0000	98.8858	68.4996	1065	0	1065	12	12	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	66.6667	100.0000	50.0000	98.4000	1	0	1	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	*	99.0897	98.4762	99.7110	62.4593	1034	16	1035	3	3	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	het	99.6807	99.5745	99.7872	69.5003	468	2	469	1	1	100.0000
ckim-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.6269	100.0000	99.2565	66.2060	267	0	267	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l150_m0_e0	homalt	98.5294	100.0000	97.1014	89.4009	67	0	67	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m0_e0	homalt	94.7368	100.0000	90.0000	96.9880	9	0	9	1	1	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m1_e0	homalt	97.7778	100.0000	95.6522	94.3696	44	0	44	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m2_e0	homalt	97.8261	100.0000	95.7447	95.1696	45	0	45	2	2	100.0000
ckim-gatk	INDEL	I1_5	map_l250_m2_e1	homalt	97.8723	100.0000	95.8333	95.1759	46	0	46	2	2	100.0000
ckim-gatk	INDEL	I1_5	segdup	homalt	99.5772	99.5772	99.5772	92.8593	471	2	471	2	2	100.0000
ckim-gatk	INDEL	I6_15	HG002complexvar	homalt	98.3779	99.9176	96.8850	55.5556	1213	1	1213	39	39	100.0000
ckim-gatk	INDEL	I6_15	HG002compoundhet	hetalt	95.9864	92.3041	99.9748	28.2337	7880	657	7921	2	2	100.0000
ckim-gatk	INDEL	I6_15	func_cds	*	97.6744	97.6744	97.6744	41.0959	42	1	42	1	1	100.0000
ckim-gatk	INDEL	I6_15	func_cds	homalt	96.7742	100.0000	93.7500	40.7407	15	0	15	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	93.8037	88.4906	99.7955	45.1178	469	61	488	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	92.9134	100.0000	86.7647	76.7123	59	0	59	9	9	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.7267	93.7500	99.8985	40.2385	2925	195	2954	3	3	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.6181	93.5621	99.8804	39.4313	3299	227	3340	4	4	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	94.4606	91.0112	98.1818	72.3618	162	16	162	3	3	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	96.0000	100.0000	92.3077	69.5312	36	0	36	3	3	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	99.0047	98.3051	99.7143	69.9828	348	6	349	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.4595	100.0000	98.9247	70.0000	92	0	92	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	94.0377	88.9807	99.7041	43.6667	323	40	337	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	88.8889	100.0000	80.0000	79.4521	24	0	24	6	6	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.3956	93.1863	99.8338	31.7550	2366	173	2403	4	4	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	96.7765	93.8813	99.8559	30.0168	2056	134	2079	3	3	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.3003	93.0030	99.8400	33.3511	2459	185	2496	4	4	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.6181	93.5621	99.8804	39.4313	3299	227	3340	4	4	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	95.9847	92.4337	99.8195	35.5314	1637	134	1659	3	3	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	83.4015	72.2892	98.5507	28.8660	60	23	68	1	1	100.0000
ckim-gatk	INDEL	I6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.5392	100.0000	99.0826	67.8940	216	0	216	2	2	100.0000
ckim-gatk	INDEL	I6_15	map_l150_m0_e0	*	87.5000	87.5000	87.5000	97.4922	7	1	7	1	1	100.0000
ckim-gatk	INDEL	I6_15	map_l150_m0_e0	het	88.8889	100.0000	80.0000	97.8166	4	0	4	1	1	100.0000
ckim-gatk	INDEL	I6_15	map_l250_m0_e0	*		0.0000	0.0000	99.4253	0	1	0	1	1	100.0000

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