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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
5701-5750 / 86044 show all
hfeng-pmm1INDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
85.1335
74.1972
99.8510
26.9063
64722567011
100.0000
hfeng-pmm1INDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
88.8889
91.9255
86.0465
34.3511
148131482424
100.0000
hfeng-pmm1INDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.7054
99.5294
99.8819
48.1640
846484611
100.0000
hfeng-pmm1INDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.0845
94.4515
99.8686
24.7280
7494476011
100.0000
hfeng-pmm1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
97.8546
96.4789
99.2701
42.4370
137513611
100.0000
hfeng-pmm1INDELD6_15lowcmp_SimpleRepeat_triTR_51to200het
95.7427
95.8333
95.6522
73.8636
2312211
100.0000
hfeng-pmm1INDELD6_15segduphomalt
98.0392
100.0000
96.1538
91.6129
5005022
100.0000
hfeng-pmm1INDELI16_PLUS*hetalt
96.1260
92.8027
99.6962
58.0768
1947151196966
100.0000
hfeng-pmm1INDELI16_PLUSHG002complexvarhetalt
96.9799
94.9254
99.1254
69.6996
3181734033
100.0000
hfeng-pmm1INDELI16_PLUSHG002compoundhethetalt
96.2598
92.8333
99.9491
45.9846
1943150196311
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.1027
94.6827
99.6497
66.9177
5523156922
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
96.4427
100.0000
93.1298
86.0341
122012299
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.2852
94.9924
99.6914
70.8502
6263364622
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
95.9161
92.6686
99.3994
59.8795
3162533122
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.4177
93.7063
99.2908
56.4815
2681828022
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
95.6522
100.0000
91.6667
87.3684
2202222
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.0664
92.8947
99.4624
64.1618
3532737022
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
97.2852
94.9924
99.6914
70.8502
6263364622
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
95.9441
92.8315
99.2727
67.4171
2592027322
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_diTR_11to50homalt
94.2529
100.0000
89.1304
87.5000
4104155
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10*
95.8314
95.7447
95.9184
80.1619
4524722
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
80.0000
100.0000
66.6667
89.0909
40422
100.0000
hfeng-pmm1INDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
98.9011
100.0000
97.8261
82.2394
4504511
100.0000
hfeng-pmm1INDELI16_PLUSmap_sirenhomalt
95.2381
95.2381
95.2381
94.8780
2012011
100.0000
hfeng-pmm1INDELI1_5*hetalt
97.1621
94.4975
99.9812
62.7564
105796161063722
100.0000
hfeng-pmm1INDELI1_5HG002complexvarhetalt
98.1752
96.5238
99.8841
71.0548
166660172422
100.0000
hfeng-pmm1INDELI1_5HG002compoundhethetalt
97.1665
94.4976
99.9906
57.5817
105626151061811
100.0000
hfeng-pmm1INDELI1_5lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
97.0018
97.1731
96.8310
69.5931
275827599
100.0000
hfeng-pmm1INDELI1_5lowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
99.5198
99.6042
99.4355
71.4918
35231435232020
100.0000
hfeng-pmm1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
99.2519
99.5000
99.0050
61.8596
199119922
100.0000
hfeng-pmm1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
91.4634
91.4634
91.4634
76.4368
7577577
100.0000
hfeng-pmm1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhomalt
97.8395
97.6888
97.9907
65.9474
634156341313
100.0000
hfeng-pmm1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhomalt
98.7719
98.5989
98.9455
64.4153
563856366
100.0000
hfeng-pmm1INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhomalt
98.6837
98.6418
98.7256
72.6343
11621611621515
100.0000
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_diTR_11to50homalt
99.5579
99.8227
99.2945
72.0827
563156344
100.0000
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10homalt
99.8968
100.0000
99.7938
63.6432
968096822
100.0000
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50homalt
99.4843
99.6244
99.3446
67.0980
10614106177
100.0000
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_triTR_11to50*
99.3302
98.8571
99.8079
61.2435
103812103922
100.0000
hfeng-pmm1INDELI1_5lowcmp_SimpleRepeat_triTR_11to50homalt
99.4393
99.6255
99.2537
64.1232
266126622
100.0000
hfeng-pmm1INDELI1_5map_l150_m0_e0*
97.7044
96.5909
98.8439
91.2714
170617122
100.0000
hfeng-pmm1INDELI1_5map_l150_m0_e0homalt
98.5294
100.0000
97.1014
87.7660
6706722
100.0000
hfeng-pmm1INDELI1_5map_l250_m0_e0*
93.6170
91.6667
95.6522
97.8444
2222211
100.0000
hfeng-pmm1INDELI1_5map_l250_m0_e0homalt
94.7368
100.0000
90.0000
96.4158
90911
100.0000
hfeng-pmm1INDELI1_5map_l250_m1_e0homalt
97.7778
100.0000
95.6522
93.4097
4404422
100.0000
hfeng-pmm1INDELI1_5map_l250_m2_e0homalt
97.8261
100.0000
95.7447
94.3713
4504522
100.0000
hfeng-pmm1INDELI1_5map_l250_m2_e1homalt
97.8723
100.0000
95.8333
94.4121
4604622
100.0000
hfeng-pmm1INDELI1_5segduphomalt
99.5772
99.5772
99.5772
92.5664
471247122
100.0000
hfeng-pmm1INDELI6_15*hetalt
96.4031
93.0885
99.9625
39.0201
7960591800033
100.0000
hfeng-pmm1INDELI6_15HG002complexvar*
98.2070
97.1411
99.2967
57.3261
465513746593333
100.0000
hfeng-pmm1INDELI6_15HG002complexvarhet
98.5354
97.1550
99.9556
58.9168
228867225211
100.0000