PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
4851-4900 / 86044 show all
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_51to200hetalt
78.0488
64.0000
100.0000
50.0000
1691300
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
ndellapenna-hhgaINDELD16_PLUSmap_l100_m0_e0homalt
100.0000
100.0000
100.0000
93.0556
50500
ndellapenna-hhgaINDELD16_PLUSmap_l125_m0_e0hetalt
100.0000
100.0000
100.0000
91.6667
10100
ndellapenna-hhgaINDELD16_PLUSmap_l125_m0_e0homalt
100.0000
100.0000
100.0000
95.2381
20200
ndellapenna-hhgaINDELD16_PLUSmap_l125_m1_e0hetalt
80.0000
66.6667
100.0000
94.4444
21100
ndellapenna-hhgaINDELD16_PLUSmap_l125_m1_e0homalt
100.0000
100.0000
100.0000
94.8718
40400
ndellapenna-hhgaINDELD16_PLUSmap_l125_m2_e0hetalt
80.0000
66.6667
100.0000
94.4444
21100
ndellapenna-hhgaINDELD16_PLUSmap_l125_m2_e0homalt
100.0000
100.0000
100.0000
95.2381
40400
ndellapenna-hhgaINDELD16_PLUSmap_l125_m2_e1homalt
100.0000
100.0000
100.0000
95.2381
40400
ndellapenna-hhgaINDELD16_PLUSmap_l150_m0_e0hetalt
0.0000
100.0000
00000
ndellapenna-hhgaINDELD16_PLUSmap_l150_m0_e0homalt
0.0000
100.0000
00000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
44.4444
0.0000
0.0000
45000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
92.9780
0.0000
0.0000
109983000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
82.0933
0.0000
0.0000
651142000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
97.0890
0.0000
0.0000
56717000
qzeng-customINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
75.2577
0.0000
0.0000
7324000
qzeng-customINDELD6_15map_l100_m0_e0hetalt
0.0000
89.4737
0.0000
0.0000
172000
qzeng-customINDELD6_15map_l100_m1_e0hetalt
0.0000
79.4118
0.0000
0.0000
5414000
qzeng-customINDELD6_15map_l100_m2_e0hetalt
0.0000
79.4118
0.0000
0.0000
5414000
qzeng-customINDELD6_15map_l100_m2_e1hetalt
0.0000
78.0822
0.0000
0.0000
5716000
qzeng-customINDELD6_15map_l125_m0_e0hetalt
0.0000
83.3333
0.0000
0.0000
51000
qzeng-customINDELD6_15map_l125_m1_e0hetalt
0.0000
89.4737
0.0000
0.0000
172000
qzeng-customINDELD6_15map_l125_m2_e0hetalt
0.0000
89.4737
0.0000
0.0000
172000
qzeng-customINDELD6_15map_l125_m2_e1hetalt
0.0000
85.0000
0.0000
0.0000
173000
qzeng-customINDELD6_15map_l150_m0_e0hetalt
0.0000
80.0000
0.0000
0.0000
41000
qzeng-customINDELD6_15map_l150_m1_e0hetalt
0.0000
87.5000
0.0000
0.0000
71000
qzeng-customINDELD6_15map_l150_m2_e0hetalt
0.0000
87.5000
0.0000
0.0000
71000
qzeng-customINDELD6_15map_l150_m2_e1hetalt
0.0000
77.7778
0.0000
0.0000
72000
qzeng-customINDELD6_15map_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
qzeng-customINDELD6_15map_l250_m0_e0homalt
66.6667
50.0000
100.0000
97.5309
11200
qzeng-customINDELD6_15map_l250_m1_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
qzeng-customINDELD6_15map_l250_m2_e0hetalt
0.0000
100.0000
0.0000
0.0000
20000
qzeng-customINDELD6_15map_l250_m2_e1hetalt
0.0000
100.0000
0.0000
0.0000
20000
qzeng-customINDELD6_15map_sirenhetalt
0.0000
82.8283
0.0000
0.0000
8217000
qzeng-customINDELD6_15segduphetalt
0.0000
81.6327
0.0000
0.0000
409000
qzeng-customINDELD6_15segdupwithalt*
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalthet
0.0000
100.0000
00000
qzeng-customINDELD6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000