PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
43101-43150 / 86044 show all
gduggal-snapvardSNP*tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNP*tech_badpromotershomalt
90.4110
82.5000
100.0000
44.9153
66146500
gduggal-snapvardSNPti*hetalt
0.0000
1.0309
0.0000
0.0000
6576000
gduggal-snapvardSNPtiHG002complexvarhetalt
0.0000
2.8986
0.0000
0.0000
6201000
gduggal-snapvardSNPtiHG002compoundhethetalt
0.0000
1.0363
0.0000
0.0000
6573000
gduggal-snapvardSNPtidecoy*
0.0000
0.0000
100.0000
99.9986
00200
gduggal-snapvardSNPtidecoyhet
0.0000
100.0000
00000
gduggal-snapvardSNPtidecoyhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtidecoyhomalt
0.0000
0.0000
100.0000
99.9896
00200
gduggal-snapvardSNPtifunc_cdshetalt
0.0000
0.0000
0.0000
08000
gduggal-snapvardSNPtilowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
16.6667
0.0000
0.0000
15000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
0.0000
8.3333
0.0000
0.0000
111000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
0.0000
50.0000
0.0000
0.0000
11000
gduggal-snapvardSNPtilowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
8.3333
0.0000
0.0000
111000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
100.0000
0.0000
0.0000
10000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
02000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapvardSNPtilowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000