PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
40051-40100 / 86044 show all
gduggal-snapfbINDELD1_5decoyhet
100.0000
100.0000
100.0000
99.9690
20200
gduggal-snapfbINDELD1_5decoyhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD1_5decoyhomalt
100.0000
100.0000
100.0000
99.9493
10100
gduggal-snapfbINDELD1_5func_cdshetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5func_cdshomalt
98.6301
97.2973
100.0000
28.7129
7227200
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
95.2381
90.9091
100.0000
99.4366
1011000
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
93.3333
87.5000
100.0000
99.2812
71800
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6805
20200
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.4104
1001000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
99.2467
70800
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
10000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
99.6678
20200
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
100.0000
01000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-snapfbINDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.0588
30300
gduggal-snapfbINDELD1_5map_l125_m1_e0hetalt
81.8182
69.2308
100.0000
96.7136
94700
gduggal-snapfbINDELD1_5map_l125_m2_e0hetalt
80.0000
66.6667
100.0000
96.6102
105800
gduggal-snapfbINDELD1_5map_l125_m2_e1hetalt
80.0000
66.6667
100.0000
96.6667
105800
gduggal-snapfbINDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.3333
20200
gduggal-snapfbINDELD1_5map_l150_m1_e0hetalt
72.7273
57.1429
100.0000
97.6879
43400
gduggal-snapfbINDELD1_5map_l150_m2_e0hetalt
72.7273
57.1429
100.0000
97.8947
43400
gduggal-snapfbINDELD1_5map_l150_m2_e1hetalt
76.9231
62.5000
100.0000
97.4093
53500
gduggal-snapfbINDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
98.5635
1301300
gduggal-snapfbINDELD1_5map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
97.5000
21200
gduggal-snapfbINDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
96.5261
5615600
gduggal-snapfbINDELD1_5map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
97.8261
21200
gduggal-snapfbINDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
96.7367
5915900
gduggal-snapfbINDELD1_5map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
97.8947
21200
gduggal-snapfbINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
96.8074
5915900
gduggal-snapfbINDELD1_5segduphetalt
90.5263
82.6923
100.0000
98.1308
4391400
gduggal-snapfbINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9941
10100
gduggal-snapfbINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9904
10100
gduggal-snapfbINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
gduggal-snapfbINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000