PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
31951-32000 / 86044 show all
hfeng-pmm2INDELC6_15map_l250_m2_e1hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_l250_m2_e1homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_siren*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_sirenhet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_sirenhetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15map_sirenhomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segdup*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segduphet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segduphetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segduphomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segdupwithalt*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segdupwithalthet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segdupwithalthetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15segdupwithalthomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromoters*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromotershet
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromotershetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELC6_15tech_badpromotershomalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSHG002compoundhethetalt
96.7604
93.7241
100.0000
26.3804
1807121192000
hfeng-pmm2INDELD16_PLUSdecoy*
100.0000
100.0000
100.0000
99.1549
60600
hfeng-pmm2INDELD16_PLUSdecoyhet
100.0000
100.0000
100.0000
99.2278
40400
hfeng-pmm2INDELD16_PLUSdecoyhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELD16_PLUSdecoyhomalt
100.0000
100.0000
100.0000
98.7261
20200
hfeng-pmm2INDELD16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSfunc_cdshomalt
100.0000
100.0000
100.0000
69.2308
40400
hfeng-pmm2INDELD16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
94.1176
10100
hfeng-pmm2INDELD16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
98.0701
96.2133
100.0000
37.0181
124549135600
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
84.8837
1011300
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
93.3333
10100
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
73.2558
1902300
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
48.1481
1201400
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
46.4467
211021100
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
98.1661
96.3983
100.0000
32.2115
9103498700
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_11to50hetalt
98.4456
96.9388
100.0000
33.7549
7602483800
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_51to200hetalt
91.6049
84.5103
100.0000
35.3276
3716845400
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10hetalt
100.0000
100.0000
100.0000
55.8824
1201500
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
83.0882
2302300
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
92.9688
90900
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
96.9940
1501500
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_11to50hetalt
98.4520
96.9512
100.0000
38.2784
3181033700
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
100.0000
00000
hfeng-pmm2INDELD16_PLUSlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000