PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
31051-31100 / 86044 show all
jlack-gatkINDELI1_5map_l150_m2_e1hetalt
100.0000
100.0000
100.0000
96.1089
1001000
jlack-gatkINDELI1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
98.4127
20200
jlack-gatkINDELI1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
98.6842
20200
jlack-gatkINDELI1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
98.7013
20200
jlack-gatkINDELI1_5map_sirenhetalt
97.2477
94.6429
100.0000
87.9682
106610600
jlack-gatkINDELI1_5segduphetalt
97.8723
95.8333
100.0000
96.2036
4624700
jlack-gatkINDELI1_5segdupwithalt*
0.0000
100.0000
00000
jlack-gatkINDELI1_5segdupwithalthet
0.0000
100.0000
00000
jlack-gatkINDELI1_5segdupwithalthetalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5segdupwithalthomalt
0.0000
100.0000
00000
jlack-gatkINDELI1_5tech_badpromoters*
100.0000
100.0000
100.0000
52.1739
2202200
jlack-gatkINDELI1_5tech_badpromotershet
100.0000
100.0000
100.0000
42.8571
80800
jlack-gatkINDELI1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
10100
jlack-gatkINDELI1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
56.6667
1301300
jlack-gatkINDELI6_15decoy*
0.0000
100.0000
00000
jlack-gatkINDELI6_15decoyhet
0.0000
100.0000
00000
jlack-gatkINDELI6_15decoyhetalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15decoyhomalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15func_cdshet
100.0000
100.0000
100.0000
44.1860
2402400
jlack-gatkINDELI6_15func_cdshetalt
85.7143
75.0000
100.0000
40.0000
31300
jlack-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
87.0370
77.0492
100.0000
56.0748
47144700
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
95.7055
91.7647
100.0000
59.8985
7877900
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
99.5885
99.1803
100.0000
71.7290
121112100
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
61.7188
4844900
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10*
99.0228
98.0645
100.0000
83.4056
152315300
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10het
99.1870
98.3871
100.0000
87.0021
6116200
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.6744
95.4545
100.0000
75.1479
4224200
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.2464
4904900
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.8657
20200
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.4751
20200
jlack-gatkINDELI6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000