PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
29201-29250 / 86044 show all
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
97.0588
10100
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.1818
96.4286
100.0000
74.6479
108410800
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
99.1597
98.3333
100.0000
80.7818
5915900
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
77.8772
346034600
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.5952
84.4937
100.0000
38.5463
5349855800
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.2723
92.8126
100.0000
27.2105
4313334436300
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
96.9697
94.1176
100.0000
25.6765
3792237381800
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.2383
92.7494
100.0000
31.0430
4426346447600
hfeng-pmm3INDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.6611
93.5380
100.0000
39.2016
5515381557400
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_11to50hetalt
96.9533
94.0867
100.0000
30.1357
3580225360500
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_51to200*
74.7720
59.7087
100.0000
57.0934
1238312400
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
89.7959
81.4815
100.0000
98.0952
225200
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_51to200hetalt
72.1429
56.4246
100.0000
29.0698
1017812200
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_homopolymer_6to10hetalt
98.3923
96.8354
100.0000
72.8559
3061030700
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9924
10100
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9812
10100
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.7466
97.5243
100.0000
41.8848
110328111000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
96.6667
93.5484
100.0000
39.7183
2031421400
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
98.9011
10100
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.3569
98.7220
100.0000
35.2201
309430900
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
95.4545
91.3043
100.0000
12.5000
2122100
hfeng-pmm3INDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
hfeng-pmm3INDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
93.5252
90900
hfeng-pmm3INDELI1_5map_l100_m1_e0hetalt
96.4706
93.1818
100.0000
88.1503
4134100
hfeng-pmm3INDELI1_5map_l100_m2_e0hetalt
96.4706
93.1818
100.0000
89.2670
4134100
hfeng-pmm3INDELI1_5map_l100_m2_e1hetalt
96.5517
93.3333
100.0000
89.2308
4234200
hfeng-pmm3INDELI1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
95.8763
40400
hfeng-pmm3INDELI1_5map_l125_m1_e0hetalt
100.0000
100.0000
100.0000
92.7660
1701700
hfeng-pmm3INDELI1_5map_l125_m2_e0hetalt
97.2973
94.7368
100.0000
93.3824
1811800
hfeng-pmm3INDELI1_5map_l125_m2_e1hetalt
97.2973
94.7368
100.0000
93.5018
1811800
hfeng-pmm3INDELI1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
95.7746
30300
hfeng-pmm3INDELI1_5map_l150_m1_e0hetalt
100.0000
100.0000
100.0000
94.8571
90900
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
95.2381
90.9091
100.0000
83.1169
1011300
hfeng-pmm1INDELD16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
92.3077
10100