PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
28951-29000 / 86044 show all
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
100.0000
00000
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.7831
99.5671
100.0000
29.1217
460246000
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_triTR_11to50homalt
100.0000
100.0000
100.0000
38.4829
13300133000
hfeng-pmm3INDELD1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.4783
87.7551
100.0000
29.5082
4364300
hfeng-pmm3INDELD1_5map_l100_m0_e0hetalt
92.3077
85.7143
100.0000
93.3702
1221200
hfeng-pmm3INDELD1_5map_l100_m1_e0hetalt
94.3820
89.3617
100.0000
89.9761
4254200
hfeng-pmm3INDELD1_5map_l100_m2_e0hetalt
94.5055
89.5833
100.0000
90.2655
4354400
hfeng-pmm3INDELD1_5map_l100_m2_e1hetalt
94.8454
90.1961
100.0000
89.8925
4654700
hfeng-pmm3INDELD1_5map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
97.5410
30300
hfeng-pmm3INDELD1_5map_l125_m1_e0hetalt
96.0000
92.3077
100.0000
95.3125
1211200
hfeng-pmm3INDELD1_5map_l125_m2_e0hetalt
92.8571
86.6667
100.0000
95.6229
1321300
hfeng-pmm3INDELD1_5map_l125_m2_e1hetalt
92.8571
86.6667
100.0000
95.7377
1321300
hfeng-pmm3INDELD1_5map_l150_m0_e0hetalt
100.0000
100.0000
100.0000
97.8261
20200
hfeng-pmm3INDELD1_5map_l150_m1_e0hetalt
92.3077
85.7143
100.0000
97.0588
61600
hfeng-pmm3INDELD1_5map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
97.4138
61600
hfeng-pmm3INDELD1_5map_l150_m2_e1hetalt
93.3333
87.5000
100.0000
97.0711
71700
hfeng-pmm3INDELD1_5map_l250_m0_e0hetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD1_5map_l250_m0_e0homalt
100.0000
100.0000
100.0000
96.4578
1301300
hfeng-pmm3INDELD1_5map_l250_m1_e0hetalt
100.0000
100.0000
100.0000
97.3214
30300
hfeng-pmm3INDELD1_5map_l250_m1_e0homalt
99.1150
98.2456
100.0000
92.5433
5615600
hfeng-pmm3INDELD1_5map_l250_m2_e0hetalt
100.0000
100.0000
100.0000
97.8102
30300
hfeng-pmm3INDELD1_5map_l250_m2_e0homalt
99.1597
98.3333
100.0000
93.2262
5915900
hfeng-pmm3INDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.8723
30300
hfeng-pmm3INDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
93.4004
5915900
hfeng-pmm3INDELD1_5map_sirenhetalt
95.6522
91.6667
100.0000
89.9478
7777700
hfeng-pmm3INDELD1_5segduphetalt
98.0392
96.1538
100.0000
95.3425
5025100
hfeng-pmm3INDELD1_5segduphomalt
100.0000
100.0000
100.0000
93.8242
359035900
hfeng-pmm3INDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9932
10100
hfeng-pmm3INDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9892
10100
hfeng-pmm3INDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
hfeng-pmm3INDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD1_5tech_badpromoters*
100.0000
100.0000
100.0000
45.7143
1901900
hfeng-pmm3INDELD1_5tech_badpromotershet
100.0000
100.0000
100.0000
52.9412
80800
hfeng-pmm3INDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
hfeng-pmm3INDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
hfeng-pmm3INDELD6_15decoy*
100.0000
100.0000
100.0000
99.8900
10100
hfeng-pmm3INDELD6_15decoyhet
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.1150
10100
hfeng-pmm3INDELD6_15decoyhomalt
0.0000
100.0000
00000
hfeng-pmm3INDELD6_15func_cds*
98.8235
97.6744
100.0000
51.7241
4214200
hfeng-pmm3INDELD6_15func_cdshet
98.2456
96.5517
100.0000
48.1481
2812800
hfeng-pmm3INDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
hfeng-pmm3INDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
57.1429
1201200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
96.7213
60600
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.5207
30300
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
90.0000
20200
hfeng-pmm3INDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
97.6190
10100
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
90.1408
82.0513
100.0000
61.4458
3273200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
98.8235
97.6744
100.0000
76.5363
4214200
hfeng-pmm3INDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.5155
40400