PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
25501-25550 / 86044 show all
egarrison-hhgaINDELI16_PLUSmap_l250_m2_e1homalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.3451
40300
egarrison-hhgaINDELI16_PLUSsegduphomalt
97.2973
94.7368
100.0000
90.6736
1811800
egarrison-hhgaINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
69.2308
40400
egarrison-hhgaINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
66.6667
20200
egarrison-hhgaINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
egarrison-hhgaINDELI1_5decoy*
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5decoyhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5decoyhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5decoyhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
50.0000
20200
egarrison-hhgaINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
29.1667
119011900
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9336
10100
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.3871
10100
egarrison-hhgaINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.9319
10100
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
98.2456
10100
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_diTR_51to200het
85.1064
74.0741
100.0000
88.3721
207500
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9916
10100
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9816
10100
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
93.0233
86.9565
100.0000
13.0435
2032000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_gt200*
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_gt200het
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5lowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
egarrison-hhgaINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
94.6429
90900