PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 467 468 469 470 471 472 473 474 475 ... 1720 1721 » 23501-23550 / 86044 show all
dgrover-gatk	INDEL	I1_5	decoy	*		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	decoy	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	decoy	homalt		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	33.3333	2	0	2	0	0
dgrover-gatk	INDEL	I1_5	func_cds	homalt	100.0000	100.0000	100.0000	30.4094	119	0	119	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8652	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	97.0588	1	0	1	0	0
dgrover-gatk	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m1_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m1_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m1_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m1_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e0	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e0	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e0	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e0	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e1	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e1	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e1	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_l250_m2_e1	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_siren	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_siren	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_siren	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	map_siren	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdup	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdup	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdup	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdup	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdupwithalt	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdupwithalt	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdupwithalt	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	segdupwithalt	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	tech_badpromoters	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	tech_badpromoters	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	tech_badpromoters	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C1_5	tech_badpromoters	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	*	*	0.0000	71.4286	0.0000	0.0000	5	2	0	0	0
ckim-isaac	INDEL	C6_15	*	het	0.0000	71.4286	0.0000	0.0000	5	2	0	0	0
ckim-isaac	INDEL	C6_15	*	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	*	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	*	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	het	0.0000	50.0000	0.0000	0.0000	2	2	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002complexvar	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	*		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	het		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
ckim-isaac	INDEL	C6_15	HG002compoundhet	homalt		0.0000	0.0000	0.0000	0	0	0	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge