PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
20651-20700 / 86044 show all
bgallagher-sentieonINDELD1_5map_l250_m2_e1hetalt
100.0000
100.0000
100.0000
97.7444
30300
bgallagher-sentieonINDELD1_5map_l250_m2_e1homalt
99.1597
98.3333
100.0000
94.8381
5915900
bgallagher-sentieonINDELD1_5segduphetalt
99.0291
98.0769
100.0000
95.2425
5115200
bgallagher-sentieonINDELD1_5segdupwithalt*
100.0000
100.0000
100.0000
99.9942
10100
bgallagher-sentieonINDELD1_5segdupwithalthet
100.0000
100.0000
100.0000
99.9912
10100
bgallagher-sentieonINDELD1_5segdupwithalthetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5segdupwithalthomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD1_5tech_badpromoters*
97.2973
94.7368
100.0000
48.5714
1811800
bgallagher-sentieonINDELD1_5tech_badpromotershet
93.3333
87.5000
100.0000
58.8235
71700
bgallagher-sentieonINDELD1_5tech_badpromotershetalt
100.0000
100.0000
100.0000
0.0000
20200
bgallagher-sentieonINDELD1_5tech_badpromotershomalt
100.0000
100.0000
100.0000
43.7500
90900
bgallagher-sentieonINDELD6_15decoy*
100.0000
100.0000
100.0000
99.9097
10100
bgallagher-sentieonINDELD6_15decoyhet
0.0000
100.0000
00000
bgallagher-sentieonINDELD6_15decoyhetalt
100.0000
100.0000
100.0000
99.0991
10100
bgallagher-sentieonINDELD6_15decoyhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD6_15func_cds*
100.0000
100.0000
100.0000
55.2083
4304300
bgallagher-sentieonINDELD6_15func_cdshet
100.0000
100.0000
100.0000
51.6667
2902900
bgallagher-sentieonINDELD6_15func_cdshetalt
100.0000
100.0000
100.0000
60.0000
20200
bgallagher-sentieonINDELD6_15func_cdshomalt
100.0000
100.0000
100.0000
61.2903
1201200
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.1429
60600
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
97.8571
30300
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
89.4737
20200
bgallagher-sentieonINDELD6_15lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
98.0392
10100
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
96.0000
92.3077
100.0000
57.6471
3633600
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
97.8022
40400
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
98.3607
20200
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
83.3333
20200
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
92.8571
20200
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
100.0000
100.0000
100.0000
94.4444
10100
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
100.0000
100.0000
100.0000
66.6667
10100
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
100.0000
100.0000
100.0000
82.0823
7407400
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.0596
90900
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_homopolymer_gt10homalt
100.0000
100.0000
100.0000
99.8100
60600
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
99.7147
99.4310
100.0000
46.1064
699469900
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.8285
99.6575
100.0000
18.1180
582258300
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_triTR_51to200hetalt
97.8947
95.8763
100.0000
23.1405
9349300
bgallagher-sentieonINDELD6_15lowcmp_SimpleRepeat_triTR_51to200homalt
100.0000
100.0000
100.0000
36.3636
2102100
bgallagher-sentieonINDELD6_15map_l100_m0_e0homalt
97.8723
95.8333
100.0000
90.4564
2312300
bgallagher-sentieonINDELD6_15map_l100_m1_e0homalt
98.4127
96.8750
100.0000
86.6953
6226200
bgallagher-sentieonINDELD6_15map_l100_m2_e0homalt
98.4375
96.9231
100.0000
87.2211
6326300
bgallagher-sentieonINDELD6_15map_l100_m2_e1homalt
98.4848
97.0149
100.0000
87.1287
6526500
bgallagher-sentieonINDELD6_15map_l125_m0_e0*
98.9247
97.8723
100.0000
93.8667
4614600
bgallagher-sentieonINDELD6_15map_l125_m0_e0het
98.2456
96.5517
100.0000
94.6257
2812800
bgallagher-sentieonINDELD6_15map_l125_m0_e0hetalt
100.0000
100.0000
100.0000
90.0000
60600