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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 391 392 393 394 395 396 397 398 399 ... 1720 1721 » 19701-19750 / 86044 show all
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	97.3995	94.9309	100.0000	39.7222	206	11	217	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	*		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	het		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	hetalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_quadTR_gt200	homalt		0.0000	0.0000	0.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.6795	99.3610	100.0000	35.0731	311	2	311	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	hetalt	97.7778	95.6522	100.0000	8.3333	22	1	22	0	0
astatham-gatk	INDEL	I1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	map_l100_m0_e0	hetalt	100.0000	100.0000	100.0000	93.9597	9	0	9	0	0
astatham-gatk	INDEL	I1_5	map_l100_m1_e0	hetalt	97.6744	95.4545	100.0000	88.5246	42	2	42	0	0
astatham-gatk	INDEL	I1_5	map_l100_m2_e0	hetalt	97.6744	95.4545	100.0000	89.4207	42	2	42	0	0
astatham-gatk	INDEL	I1_5	map_l100_m2_e1	hetalt	97.7273	95.5556	100.0000	89.3827	43	2	43	0	0
astatham-gatk	INDEL	I1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	96.2963	4	0	4	0	0
astatham-gatk	INDEL	I1_5	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	93.1452	17	0	17	0	0
astatham-gatk	INDEL	I1_5	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	93.2862	19	0	19	0	0
astatham-gatk	INDEL	I1_5	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	93.4028	19	0	19	0	0
astatham-gatk	INDEL	I1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	96.1538	3	0	3	0	0
astatham-gatk	INDEL	I1_5	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	95.2128	9	0	9	0	0
astatham-gatk	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	95.8525	9	0	9	0	0
astatham-gatk	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	95.5157	10	0	10	0	0
astatham-gatk	INDEL	I1_5	map_l250_m0_e0	het	92.8571	86.6667	100.0000	98.5507	13	2	13	0	0
astatham-gatk	INDEL	I1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	97.9798	2	0	2	0	0
astatham-gatk	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.3871	2	0	2	0	0
astatham-gatk	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.4127	2	0	2	0	0
astatham-gatk	INDEL	I1_5	map_siren	hetalt	98.6425	97.3214	100.0000	87.1765	109	3	109	0	0
astatham-gatk	INDEL	I1_5	segdup	hetalt	97.8723	95.8333	100.0000	96.0338	46	2	47	0	0
astatham-gatk	INDEL	I1_5	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	54.1667	22	0	22	0	0
astatham-gatk	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
astatham-gatk	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
astatham-gatk	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
astatham-gatk	INDEL	I6_15	HG002complexvar	hetalt	97.3132	94.7670	100.0000	56.0117	1159	64	1200	0	0
astatham-gatk	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	func_cds	het	100.0000	100.0000	100.0000	38.4615	24	0	24	0	0
astatham-gatk	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	25.0000	3	1	3	0	0
astatham-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1132	96.2963	100.0000	78.9189	78	3	78	0	0
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	90.0901	81.9672	100.0000	54.1284	50	11	50	0	0
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
astatham-gatk	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0

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