PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 341 342 343 344 345 346 347 348 349 ... 1720 1721 » 17201-17250 / 86044 show all
bgallagher-sentieon	INDEL	I1_5	map_l125_m0_e0	hetalt	100.0000	100.0000	100.0000	95.6989	4	0	4	0	0
bgallagher-sentieon	INDEL	I1_5	map_l125_m1_e0	hetalt	100.0000	100.0000	100.0000	92.4107	17	0	17	0	0
bgallagher-sentieon	INDEL	I1_5	map_l125_m2_e0	hetalt	100.0000	100.0000	100.0000	92.5490	19	0	19	0	0
bgallagher-sentieon	INDEL	I1_5	map_l125_m2_e1	hetalt	100.0000	100.0000	100.0000	92.6923	19	0	19	0	0
bgallagher-sentieon	INDEL	I1_5	map_l150_m0_e0	hetalt	100.0000	100.0000	100.0000	95.3846	3	0	3	0	0
bgallagher-sentieon	INDEL	I1_5	map_l150_m1_e0	hetalt	100.0000	100.0000	100.0000	94.5783	9	0	9	0	0
bgallagher-sentieon	INDEL	I1_5	map_l150_m2_e0	hetalt	100.0000	100.0000	100.0000	95.2880	9	0	9	0	0
bgallagher-sentieon	INDEL	I1_5	map_l150_m2_e1	hetalt	100.0000	100.0000	100.0000	94.9239	10	0	10	0	0
bgallagher-sentieon	INDEL	I1_5	map_l250_m0_e0	het	88.8889	80.0000	100.0000	98.5899	12	3	12	0	0
bgallagher-sentieon	INDEL	I1_5	map_l250_m0_e0	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I1_5	map_l250_m1_e0	hetalt	100.0000	100.0000	100.0000	97.6744	2	0	2	0	0
bgallagher-sentieon	INDEL	I1_5	map_l250_m2_e0	hetalt	100.0000	100.0000	100.0000	98.1308	2	0	2	0	0
bgallagher-sentieon	INDEL	I1_5	map_l250_m2_e1	hetalt	100.0000	100.0000	100.0000	98.1651	2	0	2	0	0
bgallagher-sentieon	INDEL	I1_5	map_siren	hetalt	98.6425	97.3214	100.0000	86.1499	109	3	109	0	0
bgallagher-sentieon	INDEL	I1_5	segdup	hetalt	97.8723	95.8333	100.0000	95.6881	46	2	47	0	0
bgallagher-sentieon	INDEL	I1_5	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I1_5	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I1_5	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I1_5	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I1_5	tech_badpromoters	*	100.0000	100.0000	100.0000	54.1667	22	0	22	0	0
bgallagher-sentieon	INDEL	I1_5	tech_badpromoters	het	100.0000	100.0000	100.0000	46.6667	8	0	8	0	0
bgallagher-sentieon	INDEL	I1_5	tech_badpromoters	hetalt	100.0000	100.0000	100.0000	50.0000	1	0	1	0	0
bgallagher-sentieon	INDEL	I1_5	tech_badpromoters	homalt	100.0000	100.0000	100.0000	58.0645	13	0	13	0	0
bgallagher-sentieon	INDEL	I6_15	HG002complexvar	hetalt	96.5751	93.3769	100.0000	55.8131	1142	81	1182	0	0
bgallagher-sentieon	INDEL	I6_15	decoy	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	decoy	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	decoy	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	func_cds	het	100.0000	100.0000	100.0000	38.4615	24	0	24	0	0
bgallagher-sentieon	INDEL	I6_15	func_cds	hetalt	85.7143	75.0000	100.0000	25.0000	3	1	3	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	98.1132	96.2963	100.0000	78.9189	78	3	78	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	88.0734	78.6885	100.0000	54.2857	48	13	48	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.4318	98.8701	100.0000	74.0356	175	2	175	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	97.5904	95.2941	100.0000	57.0681	81	4	82	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	100.0000	100.0000	100.0000	71.8245	122	0	122	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	97.0297	94.2308	100.0000	59.6774	49	3	50	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
bgallagher-sentieon	INDEL	I6_15	lowcmp_SimpleRepeat_homopolymer_6to10	*	98.6928	97.4194	100.0000	82.4480	151	4	152	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge