PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
17151-17200 / 86044 show all
bgallagher-sentieonINDELI16_PLUSsegduphetalt
100.0000
100.0000
100.0000
97.2222
40400
bgallagher-sentieonINDELI16_PLUSsegdupwithalt*
0.0000
100.0000
00000
bgallagher-sentieonINDELI16_PLUSsegdupwithalthet
0.0000
100.0000
00000
bgallagher-sentieonINDELI16_PLUSsegdupwithalthetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI16_PLUSsegdupwithalthomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI16_PLUStech_badpromoters*
100.0000
100.0000
100.0000
73.3333
40400
bgallagher-sentieonINDELI16_PLUStech_badpromotershet
100.0000
100.0000
100.0000
75.0000
20200
bgallagher-sentieonINDELI16_PLUStech_badpromotershetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI16_PLUStech_badpromotershomalt
100.0000
100.0000
100.0000
66.6667
20200
bgallagher-sentieonINDELI1_5decoy*
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5decoyhet
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5decoyhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5decoyhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5func_cdshetalt
100.0000
100.0000
100.0000
33.3333
20200
bgallagher-sentieonINDELI1_5func_cdshomalt
100.0000
100.0000
100.0000
30.4094
119011900
bgallagher-sentieonINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8621
10100
bgallagher-sentieonINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.6667
10100
bgallagher-sentieonINDELI1_5lowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhetalt
92.3077
85.7143
100.0000
59.7765
72127200
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged*
100.0000
100.0000
100.0000
99.8569
10100
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhetalt
100.0000
100.0000
100.0000
96.4286
10100
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
98.1818
96.4286
100.0000
74.2243
108410800
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
99.1597
98.3333
100.0000
80.5281
5915900
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
91.5952
84.4937
100.0000
37.5973
5349856100
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged*
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhet
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhetalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_mergedhomalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10*
100.0000
100.0000
100.0000
99.9931
10100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10hetalt
100.0000
100.0000
100.0000
99.9830
10100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.6559
97.3475
100.0000
41.6139
110130110700
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.3995
94.9309
100.0000
38.5269
2061121700
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_51to200homalt
100.0000
100.0000
100.0000
99.1228
10100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_triTR_11to50hetalt
99.5185
99.0415
100.0000
33.4764
310331000
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_triTR_51to200hetalt
95.4545
91.3043
100.0000
12.5000
2122100
bgallagher-sentieonINDELI1_5lowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
bgallagher-sentieonINDELI1_5map_l100_m0_e0hetalt
100.0000
100.0000
100.0000
93.1298
90900
bgallagher-sentieonINDELI1_5map_l100_m1_e0hetalt
97.6744
95.4545
100.0000
87.3112
4224200
bgallagher-sentieonINDELI1_5map_l100_m2_e0hetalt
97.6744
95.4545
100.0000
88.3333
4224200
bgallagher-sentieonINDELI1_5map_l100_m2_e1hetalt
97.7273
95.5556
100.0000
88.3152
4324300