PrecisionFDA
Truth Challenge
Engage and improve DNA test results with our community challenges
Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
| Entry | Type | Subtype | Subset | Genotype | F-score | Recall | Precision | Frac_NA | Truth TP | Truth FN | Query TP | Query FP | FP gt | % FP ma | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
16451-16500 / 86044 show all | |||||||||||||||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m1_e0 | homalt | 70.5882 | 54.5455 | 100.0000 | 91.0448 | 18 | 15 | 18 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e0 | * | 76.5957 | 62.0690 | 100.0000 | 93.5426 | 72 | 44 | 72 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e0 | het | 78.0000 | 63.9344 | 100.0000 | 94.7651 | 39 | 22 | 39 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e0 | hetalt | 81.0811 | 68.1818 | 100.0000 | 89.9329 | 15 | 7 | 15 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e0 | homalt | 70.5882 | 54.5455 | 100.0000 | 91.8552 | 18 | 15 | 18 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e1 | * | 76.5957 | 62.0690 | 100.0000 | 93.7008 | 72 | 44 | 72 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e1 | het | 78.0000 | 63.9344 | 100.0000 | 94.8752 | 39 | 22 | 39 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e1 | hetalt | 81.0811 | 68.1818 | 100.0000 | 90.3846 | 15 | 7 | 15 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l100_m2_e1 | homalt | 70.5882 | 54.5455 | 100.0000 | 92.0354 | 18 | 15 | 18 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m0_e0 | * | 50.0000 | 33.3333 | 100.0000 | 98.5294 | 5 | 10 | 5 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m0_e0 | het | 61.5385 | 44.4444 | 100.0000 | 98.4733 | 4 | 5 | 4 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m0_e0 | homalt | 28.5714 | 16.6667 | 100.0000 | 97.8723 | 1 | 5 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m1_e0 | * | 70.7317 | 54.7170 | 100.0000 | 95.6652 | 29 | 24 | 29 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m1_e0 | het | 66.6667 | 50.0000 | 100.0000 | 96.8553 | 15 | 15 | 15 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m1_e0 | hetalt | 93.3333 | 87.5000 | 100.0000 | 90.4110 | 7 | 1 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m1_e0 | homalt | 63.6364 | 46.6667 | 100.0000 | 94.1176 | 7 | 8 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e0 | * | 70.7317 | 54.7170 | 100.0000 | 96.1892 | 29 | 24 | 29 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e0 | het | 66.6667 | 50.0000 | 100.0000 | 97.2171 | 15 | 15 | 15 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e0 | hetalt | 93.3333 | 87.5000 | 100.0000 | 91.7647 | 7 | 1 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e0 | homalt | 63.6364 | 46.6667 | 100.0000 | 94.8905 | 7 | 8 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e1 | * | 70.7317 | 54.7170 | 100.0000 | 96.3057 | 29 | 24 | 29 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e1 | het | 66.6667 | 50.0000 | 100.0000 | 97.2875 | 15 | 15 | 15 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e1 | hetalt | 93.3333 | 87.5000 | 100.0000 | 92.0455 | 7 | 1 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l125_m2_e1 | homalt | 63.6364 | 46.6667 | 100.0000 | 95.1389 | 7 | 8 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m0_e0 | * | 40.0000 | 25.0000 | 100.0000 | 99.2754 | 2 | 6 | 2 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m0_e0 | het | 40.0000 | 25.0000 | 100.0000 | 99.5349 | 1 | 3 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m0_e0 | homalt | 40.0000 | 25.0000 | 100.0000 | 97.5610 | 1 | 3 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m1_e0 | * | 68.4211 | 52.0000 | 100.0000 | 97.5881 | 13 | 12 | 13 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m1_e0 | het | 63.6364 | 46.6667 | 100.0000 | 98.2368 | 7 | 8 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m1_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 94.0000 | 3 | 0 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m1_e0 | homalt | 60.0000 | 42.8571 | 100.0000 | 96.7391 | 3 | 4 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e0 | * | 68.4211 | 52.0000 | 100.0000 | 97.9066 | 13 | 12 | 13 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e0 | het | 63.6364 | 46.6667 | 100.0000 | 98.4581 | 7 | 8 | 7 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e0 | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.0000 | 3 | 0 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e0 | homalt | 60.0000 | 42.8571 | 100.0000 | 97.1963 | 3 | 4 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e1 | * | 71.4286 | 55.5556 | 100.0000 | 97.6744 | 15 | 12 | 15 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e1 | het | 66.6667 | 50.0000 | 100.0000 | 98.2906 | 8 | 8 | 8 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e1 | hetalt | 100.0000 | 100.0000 | 100.0000 | 95.1613 | 3 | 0 | 3 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l150_m2_e1 | homalt | 66.6667 | 50.0000 | 100.0000 | 96.5217 | 4 | 4 | 4 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m0_e0 | * | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m0_e0 | het | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m0_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m0_e0 | homalt | 0.0000 | 100.0000 | 0 | 1 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m1_e0 | * | 44.4444 | 28.5714 | 100.0000 | 99.3750 | 2 | 5 | 2 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m1_e0 | het | 40.0000 | 25.0000 | 100.0000 | 99.5833 | 1 | 3 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m1_e0 | hetalt | 0.0000 | 100.0000 | 0 | 0 | 0 | 0 | 0 | ||||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m1_e0 | homalt | 50.0000 | 33.3333 | 100.0000 | 98.2143 | 1 | 2 | 1 | 0 | 0 | ||
| gduggal-bwaplat | INDEL | I6_15 | map_l250_m2_e0 | * | 54.5455 | 37.5000 | 100.0000 | 99.1690 | 3 | 5 | 3 | 0 | 0 | ||