PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
12151-12200 / 86044 show all
gduggal-bwavardSNPtvlowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
0.0000
0.0000
0.0000
015000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_51to200homalt
87.5000
77.7778
100.0000
92.1348
72700
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_diTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_6to10hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10*
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10het
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_homopolymer_gt10homalt
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_11to50hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200*
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200het
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_quadTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_11to50hetalt
0.0000
0.0000
0.0000
01000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_51to200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_51to200homalt
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200*
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200het
0.0000
100.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvlowcmp_SimpleRepeat_triTR_gt200homalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvmap_l100_m0_e0hetalt
0.0000
0.0000
0.0000
016000
gduggal-bwavardSNPtvmap_l100_m1_e0hetalt
0.0000
0.0000
0.0000
041000
gduggal-bwavardSNPtvmap_l100_m2_e0hetalt
0.0000
0.0000
0.0000
042000
gduggal-bwavardSNPtvmap_l100_m2_e1hetalt
0.0000
0.0000
0.0000
043000
gduggal-bwavardSNPtvmap_l125_m0_e0hetalt
0.0000
0.0000
0.0000
09000
gduggal-bwavardSNPtvmap_l125_m1_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNPtvmap_l125_m2_e0hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNPtvmap_l125_m2_e1hetalt
0.0000
0.0000
0.0000
030000
gduggal-bwavardSNPtvmap_l150_m0_e0hetalt
0.0000
0.0000
0.0000
03000
gduggal-bwavardSNPtvmap_l150_m1_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNPtvmap_l150_m2_e0hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNPtvmap_l150_m2_e1hetalt
0.0000
0.0000
0.0000
020000
gduggal-bwavardSNPtvmap_l250_m0_e0hetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvmap_l250_m1_e0hetalt
0.0000
0.0000
0.0000
04000
gduggal-bwavardSNPtvmap_l250_m2_e0hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvmap_l250_m2_e1hetalt
0.0000
0.0000
0.0000
05000
gduggal-bwavardSNPtvmap_sirenhetalt
0.0000
1.2346
0.0000
0.0000
180000
gduggal-bwavardSNPtvsegduphetalt
0.0000
0.0000
0.0000
07000
gduggal-bwavardSNPtvsegdupwithalt*
0.0000
100.0000
00000
gduggal-bwavardSNPtvsegdupwithalthet
0.0000
100.0000
00000
gduggal-bwavardSNPtvsegdupwithalthetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvsegdupwithalthomalt
0.0000
100.0000
00000
gduggal-bwavardSNPtvtech_badpromotershetalt
0.0000
0.0000
0.0000
00000
gduggal-bwavardSNPtvtech_badpromotershomalt
93.1507
87.1795
100.0000
46.6667
3453200