PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
10251-10300 / 86044 show all
jmaeng-gatkINDEL*map_l150_m2_e0hetalt
92.3077
85.7143
100.0000
96.1207
1831800
jmaeng-gatkINDEL*map_l150_m2_e1hetalt
90.4762
82.6087
100.0000
95.9831
1941900
jmaeng-gatkINDEL*map_l250_m0_e0hetalt
0.0000
100.0000
00000
jmaeng-gatkINDEL*map_l250_m1_e0hetalt
80.0000
66.6667
100.0000
98.2063
42400
jmaeng-gatkINDEL*map_l250_m2_e0hetalt
80.0000
66.6667
100.0000
98.5185
42400
jmaeng-gatkINDEL*map_l250_m2_e1hetalt
80.0000
66.6667
100.0000
98.5507
42400
jmaeng-gatkINDEL*map_sirenhetalt
93.3045
87.4494
100.0000
86.8039
2163121800
jmaeng-gatkINDEL*segduphetalt
95.1613
90.7692
100.0000
94.5726
1181212000
jmaeng-gatkINDEL*segdupwithalt*
100.0000
100.0000
100.0000
99.9982
10100
jmaeng-gatkINDEL*segdupwithalthet
100.0000
100.0000
100.0000
99.9975
10100
jmaeng-gatkINDEL*segdupwithalthetalt
0.0000
100.0000
00000
jmaeng-gatkINDEL*segdupwithalthomalt
0.0000
100.0000
00000
jmaeng-gatkINDEL*tech_badpromoters*
99.3377
98.6842
100.0000
53.9877
7517500
jmaeng-gatkINDEL*tech_badpromotershet
98.7013
97.4359
100.0000
51.8987
3813800
jmaeng-gatkINDEL*tech_badpromotershetalt
100.0000
100.0000
100.0000
50.0000
40400
jmaeng-gatkINDEL*tech_badpromotershomalt
100.0000
100.0000
100.0000
56.5789
3303300
jmaeng-gatkINDELC16_PLUS**
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUS*het
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUS*hetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUS*homalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002complexvar*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002complexvarhet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002complexvarhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002complexvarhomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002compoundhet*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002compoundhethet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002compoundhethetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSHG002compoundhethomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSdecoy*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSdecoyhet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSdecoyhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSdecoyhomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSfunc_cds*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSfunc_cdshet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSfunc_cdshetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSfunc_cdshomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_gt200bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_merged*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhet
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhomalt
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331*
0.0000
0.0000
0.0000
00000
jmaeng-gatkINDELC16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331het
0.0000
0.0000
0.0000
00000