PrecisionFDA
Truth Challenge

Engage and improve DNA test results with our community challenges

Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt

« 1 2 ... 194 195 196 197 198 199 200 201 202 ... 1720 1721 » 9851-9900 / 86044 show all
ltrigg-rtg1	INDEL	I16_PLUS	map_l250_m1_e0	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l250_m2_e0	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l250_m2_e0	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l250_m2_e1	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_l250_m2_e1	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	map_siren	hetalt	76.9231	62.5000	100.0000	82.1429	10	6	10	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdup	*	94.3820	89.3617	100.0000	89.7311	42	5	42	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdup	het	93.3333	87.5000	100.0000	87.9781	21	3	22	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdup	hetalt	85.7143	75.0000	100.0000	97.0874	3	1	3	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdup	homalt	97.2973	94.7368	100.0000	86.1789	18	1	17	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdupwithalt	*		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdupwithalt	het		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdupwithalt	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	segdupwithalt	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	tech_badpromoters	*	100.0000	100.0000	100.0000	55.5556	4	0	4	0	0
ltrigg-rtg1	INDEL	I16_PLUS	tech_badpromoters	het	100.0000	100.0000	100.0000	50.0000	2	0	2	0	0
ltrigg-rtg1	INDEL	I16_PLUS	tech_badpromoters	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I16_PLUS	tech_badpromoters	homalt	100.0000	100.0000	100.0000	50.0000	2	0	2	0	0
ltrigg-rtg1	INDEL	I1_5	decoy	*		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	decoy	het		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	decoy	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	decoy	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	func_cds	*	100.0000	100.0000	100.0000	25.9259	180	0	180	0	0
ltrigg-rtg1	INDEL	I1_5	func_cds	het	100.0000	100.0000	100.0000	21.3333	59	0	59	0	0
ltrigg-rtg1	INDEL	I1_5	func_cds	hetalt	100.0000	100.0000	100.0000	75.0000	2	0	2	0	0
ltrigg-rtg1	INDEL	I1_5	func_cds	homalt	100.0000	100.0000	100.0000	25.6250	119	0	119	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	98.3842	96.8198	100.0000	64.1060	274	9	271	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8995	1	0	1	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	98.6486	1	0	1	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_AllRepeats_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	hetalt	96.2963	92.8571	100.0000	67.2000	78	6	82	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.4772	97.0000	100.0000	59.4937	194	6	192	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	*	100.0000	100.0000	100.0000	99.8980	1	0	1	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	hetalt	100.0000	100.0000	100.0000	98.5915	1	0	1	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	98.6425	97.3214	100.0000	83.1933	109	3	120	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.3684	98.7448	100.0000	70.7210	472	6	467	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	98.3051	96.6667	100.0000	88.0357	58	2	67	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.5646	99.1329	100.0000	74.3783	343	3	340	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	98.1366	96.3415	100.0000	67.5000	79	3	78	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	*		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	het		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	hetalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_gt200bp_gt95identity_merged	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	het	82.6087	70.3704	100.0000	76.4045	19	8	21	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt		0.0000		100.0000	0	0	0	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.7411	99.4835	100.0000	59.6808	963	5	960	0	0
ltrigg-rtg1	INDEL	I1_5	lowcmp_SimpleRepeat_homopolymer_gt10	*	100.0000	100.0000	100.0000	99.9940	1	0	1	0	0

PrecisionFDA Truth Challenge

PrecisionFDA
Truth Challenge