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Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
86001-86044 / 86044 show all
ghariani-varprowlINDELD6_15tech_badpromoters*
87.5000
82.3529
93.3333
55.8824
1431411
100.0000
ghariani-varprowlINDELD6_15tech_badpromotershet
90.0000
90.0000
90.0000
58.3333
91911
100.0000
ghariani-varprowlINDELI16_PLUSHG002complexvarhomalt
82.5036
76.0518
90.1515
62.3395
235742382626
100.0000
ghariani-varprowlINDELI16_PLUSfunc_cds*
81.8182
75.0000
90.0000
65.5172
93911
100.0000
ghariani-varprowlINDELI16_PLUSfunc_cdshet
88.8889
88.8889
88.8889
59.0909
81811
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
32.2581
20.0000
83.3333
94.0594
520511
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged*
67.2129
61.2360
74.4828
76.8000
109691083737
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhet
79.1991
87.0370
72.6562
76.5138
9414933535
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
55.0459
40.0000
88.2353
78.7500
14211522
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged*
72.9446
66.2921
81.0811
71.4286
5930601414
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhet
84.9558
90.5660
80.0000
72.3502
485481212
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
76.3006
68.7500
85.7143
66.6667
1151222
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_homopolymer_6to10homalt
57.1429
50.0000
66.6667
85.7143
22211
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_11to50homalt
72.0930
68.8889
75.6098
76.1628
3114311010
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200*
0.0000
0.0000
97.7612
026033
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200het
0.0000
0.0000
98.3051
03022
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
93.7500
00011
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50*
62.5000
54.0541
74.0741
77.3109
20172077
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50het
80.0000
87.5000
73.6842
79.3478
1421455
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_11to50homalt
75.0000
75.0000
75.0000
70.3704
62622
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200*
0.0000
0.0000
80.0000
04011
100.0000
ghariani-varprowlINDELI16_PLUSlowcmp_SimpleRepeat_triTR_51to200het
0.0000
0.0000
80.0000
02011
100.0000
ghariani-varprowlINDELI16_PLUSmap_sirenhomalt
37.0370
23.8095
83.3333
89.6552
516511
100.0000
ghariani-varprowlINDELI16_PLUSsegdup*
81.9440
76.5957
88.0952
93.0116
36113755
100.0000
ghariani-varprowlINDELI16_PLUSsegduphet
86.2745
91.6667
81.4815
94.7674
2222255
100.0000
ghariani-varprowlINDELI16_PLUStech_badpromoters*
28.5714
25.0000
33.3333
70.0000
13122
100.0000
ghariani-varprowlINDELI16_PLUStech_badpromotershet
40.0000
50.0000
33.3333
66.6667
11122
100.0000
ghariani-varprowlINDELI1_5lowcmp_SimpleRepeat_diTR_51to200homalt
0.0000
0.0000
93.7500
00011
100.0000
ghariani-varprowlINDELI1_5map_l250_m1_e0homalt
94.1176
90.9091
97.5610
92.8070
4044011
100.0000
ghariani-varprowlINDELI1_5map_l250_m2_e0homalt
94.2529
91.1111
97.6190
93.8953
4144111
100.0000
ghariani-varprowlINDELI1_5map_l250_m2_e1homalt
94.3820
91.3043
97.6744
93.9266
4244211
100.0000
ghariani-varprowlINDELI1_5tech_badpromoters*
83.7209
81.8182
85.7143
60.3774
1841833
100.0000
ghariani-varprowlINDELI1_5tech_badpromotershet
84.2105
100.0000
72.7273
57.6923
80833
100.0000
ghariani-varprowlINDELI6_15func_cds*
83.7209
83.7209
83.7209
37.6812
3673677
100.0000
ghariani-varprowlINDELI6_15func_cdshet
87.2727
100.0000
77.4194
39.2157
2402477
100.0000
ghariani-varprowlINDELI6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
59.4059
50.8475
71.4286
81.4978
3029301212
100.0000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
82.8571
80.5556
85.2941
66.0000
2972955
100.0000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhomalt
79.6040
75.0000
84.8101
64.2534
6923671212
100.0000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhomalt
78.5083
73.5294
84.2105
64.3750
50184899
100.0000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
29.0805
20.8955
47.8070
73.7629
112424109119119
100.0000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
58.6404
73.8255
48.6364
71.6495
11039107113113
100.0000
ghariani-varprowlINDELI6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
12.5000
8.3333
25.0000
91.3978
222266
100.0000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_homopolymer_6to10homalt
75.6674
63.2653
94.1176
81.0056
31183222
100.0000
ghariani-varprowlINDELI6_15lowcmp_SimpleRepeat_quadTR_51to200homalt
0.0000
0.0000
91.3793
00055
100.0000