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Explore HG002 comparison results

Use this interactive explorer to filter all results across submission entries and multiple dimensions.

Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1699 1700 1701 1702 1703 1704 1705 1706 1707 ... 1720 1721 » 85101-85150 / 86044 show all
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	het	96.8504	96.8504	96.8504	78.9037	123	4	123	4	4	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	98.8506	100.0000	97.7273	77.0833	43	0	43	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	het	99.6528	99.6528	99.6528	69.7320	574	2	574	2	2	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	93.3511	89.0909	98.0392	62.2222	49	6	50	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	het	99.8974	100.0000	99.7951	67.7888	487	0	487	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	90.3728	84.8485	96.6667	61.5385	28	5	29	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.6154	86.5925	99.5389	29.1978	1479	229	1511	7	7	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	92.1277	99.0847	86.0835	48.4103	433	4	433	70	70	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.4855	93.5742	99.5838	26.7211	6655	457	6699	28	28	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.6474	95.7705	99.5993	26.2869	5208	230	5220	21	21	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.4722	93.5461	99.5872	27.3535	6711	463	6755	28	28	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.4782	93.6096	99.5281	29.2918	7544	515	7592	36	36	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_11to50	hetalt	97.3148	95.2850	99.4329	24.6012	4547	225	4559	26	26	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	*	83.6527	80.4403	87.1324	45.1060	950	231	948	140	140	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	het	71.2447	89.8649	59.0164	73.8944	133	15	108	75	75	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	hetalt	86.0332	75.5734	99.8536	26.3215	659	213	682	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_diTR_51to200	homalt	82.5065	98.1366	71.1712	37.2881	158	3	158	64	64	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	95.8904	94.5946	97.2222	61.2903	35	2	35	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.4186	97.3773	99.4823	27.6981	1151	31	1153	6	6	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.6475	99.7647	99.5305	50.8083	848	2	848	4	4	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	96.3738	93.6948	99.2105	23.7713	743	50	754	6	6	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_SimpleRepeat_triTR_11to50	homalt	99.7743	99.7743	99.7743	34.9486	442	1	442	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	map_l100_m1_e0	homalt	96.8254	95.3125	98.3871	86.7804	61	3	61	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	map_l100_m2_e0	homalt	96.8750	95.3846	98.4127	87.3494	62	3	62	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	map_l100_m2_e1	homalt	96.9697	95.5224	98.4615	87.2798	64	3	64	1	1	100.0000
jmaeng-gatk	INDEL	D6_15	segdup	homalt	96.1538	100.0000	92.5926	92.2967	50	0	50	4	4	100.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002complexvar	hetalt	95.8690	92.8358	99.1071	67.4419	311	24	333	3	3	100.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002compoundhet	het	84.9656	91.4894	79.3103	93.9959	43	4	23	6	6	100.0000
jmaeng-gatk	INDEL	I16_PLUS	HG002compoundhet	hetalt	95.6914	91.7821	99.9485	44.7982	1921	172	1941	1	1	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.3185	93.1715	99.6855	68.3267	614	45	634	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	*	98.2955	97.1910	99.4253	81.4499	173	5	173	1	1	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	98.5915	100.0000	97.2222	85.6574	35	0	35	1	1	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	95.2805	91.4956	99.3921	56.4238	312	29	327	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	95.6672	92.3077	99.2806	52.6405	264	22	276	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	homalt	91.6667	100.0000	84.6154	87.8505	22	0	22	4	4	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	95.2111	91.3158	99.4536	61.2288	347	33	364	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.3185	93.1715	99.6855	68.3267	614	45	634	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_diTR_11to50	hetalt	95.1677	91.3978	99.2620	64.3890	255	24	269	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	80.0000	100.0000	66.6667	89.4737	4	0	4	2	2	100.0000
jmaeng-gatk	INDEL	I16_PLUS	lowcmp_SimpleRepeat_quadTR_11to50	homalt	97.8261	100.0000	95.7447	83.3333	45	0	45	2	2	100.0000
jmaeng-gatk	INDEL	I1_5	*	hetalt	95.4538	91.3354	99.9611	60.3706	10225	970	10283	4	4	100.0000
jmaeng-gatk	INDEL	I1_5	HG002complexvar	hetalt	91.9469	85.2839	99.7392	69.0289	1472	254	1530	4	4	100.0000
jmaeng-gatk	INDEL	I1_5	HG002compoundhet	hetalt	95.4604	91.3394	99.9708	56.0929	10209	968	10266	3	3	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	89.8860	81.7168	99.8700	38.3320	733	164	768	1	1	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.5172	97.8799	93.2660	69.8477	277	6	277	20	20	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	96.0184	92.3880	99.9457	61.4714	5486	452	5522	3	3	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	95.7952	91.9607	99.9635	35.1166	5422	474	5480	2	2	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.0050	99.5000	98.5149	61.3027	199	1	199	3	3	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7912	100.0000	99.5833	75.9519	478	0	478	2	2	100.0000
jmaeng-gatk	INDEL	I1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.7378	99.5812	99.8950	80.4517	951	4	951	1	1	100.0000

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