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Explore HG002 comparison results

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Entry	Type	Subtype	Subset	Genotype	F-score	Recall	Precision	Frac_NA	Truth TP	Truth FN	Query TP	Query FP	FP gt	% FP ma

« 1 2 ... 1698 1699 1700 1701 1702 1703 1704 1705 1706 ... 1720 1721 » 85051-85100 / 86044 show all
jmaeng-gatk	INDEL	D1_5	HG002compoundhet	hetalt	96.4037	93.4123	99.5930	58.4493	9543	673	9543	39	39	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.9241	87.1570	99.5086	30.3082	1588	234	1620	8	8	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_AllRepeats_51to200bp_gt95identity_merged	homalt	95.6913	98.9362	92.6526	62.5292	744	8	744	59	59	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.0103	94.5783	99.5706	64.1494	8792	504	8811	38	38	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.4888	93.5852	99.5783	30.8129	8695	596	8738	37	37	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	homalt	99.2248	99.2248	99.2248	63.9161	256	2	256	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	hetalt	94.3662	90.5405	98.5294	79.5181	67	7	67	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_merged	homalt	99.7255	99.8168	99.6344	78.0409	545	1	545	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	*	99.7175	99.6237	99.8115	81.3892	1059	4	1059	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	hetalt	94.4444	91.8919	97.1429	86.3281	34	3	34	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_merged	homalt	99.8647	100.0000	99.7297	82.0301	369	0	369	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	hetalt	92.8530	86.9868	99.5675	29.4261	1123	168	1151	5	5	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged	homalt	94.1029	98.9446	89.7129	61.3321	375	4	375	43	43	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_merged	hetalt	96.4972	93.5639	99.6204	24.2463	7574	521	7610	29	29	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_merged	hetalt	97.1401	94.7708	99.6309	23.4581	6470	357	6479	24	24	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_merged	hetalt	96.4599	93.4908	99.6237	26.2417	7641	532	7678	29	29	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_merged	hetalt	96.4888	93.5852	99.5783	30.8129	8695	596	8738	37	37	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_11to50	hetalt	96.7472	94.1475	99.4946	23.8423	6483	403	6496	33	33	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	hetalt	81.9280	69.6538	99.4536	27.2366	342	149	364	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_diTR_51to200	homalt	74.4444	94.3662	61.4679	54.5833	67	4	67	42	42	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	hetalt	95.0580	91.2409	99.2084	70.4829	375	36	376	3	3	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_homopolymer_6to10	homalt	99.9361	99.9509	99.9214	54.3780	10173	5	10173	8	8	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	hetalt	98.2315	96.7180	99.7931	31.3447	1444	49	1447	3	3	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_11to50	homalt	99.8366	99.9727	99.7008	51.3048	3665	1	3665	11	11	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	hetalt	97.4161	95.5385	99.3691	21.9212	621	29	630	4	4	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_quadTR_51to200	homalt	98.9899	99.4924	98.4925	60.5941	196	1	196	3	3	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_11to50	hetalt	99.3478	98.9177	99.7817	28.1005	457	5	457	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	*	95.2381	93.3333	97.2222	64.3564	70	5	70	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	lowcmp_SimpleRepeat_triTR_51to200	homalt	92.8571	100.0000	86.6667	59.4595	13	0	13	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m0_e0	homalt	98.8327	98.4496	99.2188	83.8384	254	4	254	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m1_e0	homalt	99.1511	98.6486	99.6587	83.2763	584	8	584	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m2_e0	homalt	99.1776	98.6907	99.6694	83.8924	603	8	603	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l100_m2_e1	homalt	99.1896	98.7097	99.6743	83.9687	612	8	612	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m0_e0	homalt	98.3051	97.9730	98.6395	87.1166	145	3	145	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m1_e0	homalt	98.8473	98.2808	99.4203	85.4859	343	6	343	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m2_e0	homalt	98.8950	98.3516	99.4444	86.2385	358	6	358	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l125_m2_e1	homalt	98.9189	98.3871	99.4565	86.2224	366	6	366	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m0_e0	homalt	98.2249	97.6471	98.8095	90.4328	83	2	83	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m1_e0	homalt	98.6726	97.8070	99.5536	87.8128	223	5	223	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m2_e0	homalt	98.7500	97.9339	99.5798	88.4466	237	5	237	1	1	100.0000
jmaeng-gatk	INDEL	D1_5	map_l150_m2_e1	homalt	98.5801	97.9839	99.1837	88.3666	243	5	243	2	2	100.0000
jmaeng-gatk	INDEL	D1_5	map_siren	homalt	99.3571	99.1438	99.5712	81.3141	1158	10	1161	5	5	100.0000
jmaeng-gatk	INDEL	D1_5	segdup	homalt	99.7222	100.0000	99.4460	94.5203	359	0	359	2	2	100.0000
jmaeng-gatk	INDEL	D6_15	*	hetalt	96.4840	93.6261	99.5219	32.9957	7653	521	7702	37	37	100.0000
jmaeng-gatk	INDEL	D6_15	HG002complexvar	hetalt	93.2190	90.3258	96.3037	47.2880	915	98	964	37	37	100.0000
jmaeng-gatk	INDEL	D6_15	HG002compoundhet	hetalt	96.5549	93.6940	99.5959	24.0546	7637	514	7641	31	31	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_AllRepeats_51to200bp_gt95identity_merged	hetalt	92.9768	87.2358	99.5265	30.0431	2064	302	2102	10	10	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_AllRepeats_lt51bp_gt95identity_merged	hetalt	97.4991	95.5520	99.5272	33.1055	6509	303	6526	31	31	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331	hetalt	96.4782	93.6096	99.5281	29.2918	7544	515	7592	36	36	100.0000
jmaeng-gatk	INDEL	D6_15	lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged	*	96.3680	95.2153	97.5490	76.7123	199	10	199	5	5	100.0000

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