PrecisionFDA
Truth Challenge

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Explore HG002 comparison results
Use this interactive explorer to filter all results across submission entries and multiple dimensions.
EntryTypeSubtypeSubsetGenotypeF-scoreRecallPrecisionFrac_NATruth TPTruth FNQuery TPQuery FPFP gt% FP ma
82901-82950 / 86044 show all
ckim-dragenINDELD6_15HG002complexvarhetalt
93.7506
91.2142
96.4321
47.8822
924899733636
100.0000
ckim-dragenINDELD6_15HG002compoundhethetalt
96.5353
93.6572
99.5958
23.6915
763451776383131
100.0000
ckim-dragenINDELD6_15lowcmp_AllRepeats_51to200bp_gt95identity_mergedhetalt
93.1933
87.6162
99.5285
30.2073
207329321111010
100.0000
ckim-dragenINDELD6_15lowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.3919
95.3611
99.5111
32.7822
649631665133232
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
96.4252
93.5104
99.5276
29.6399
753652375843636
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_merged*
98.3133
97.6077
99.0291
77.5109
204520422
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhet
99.2126
99.2126
99.2126
79.4830
126112611
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_51to200bp_gt95identity_mergedhomalt
97.6744
97.6744
97.6744
79.9065
4214211
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt101bp_gt95identity_mergedhetalt
96.3131
94.5455
98.1481
62.5000
5235311
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRgt6_lt51bp_gt95identity_mergedhetalt
93.7973
90.9091
96.8750
63.2184
3033111
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
92.4582
91.2192
93.7313
49.9720
25142422512168168
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhet
96.1405
97.7087
94.6218
72.0263
597145633232
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhetalt
92.7110
86.7096
99.6050
29.5781
1481227151366
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_mergedhomalt
86.9392
99.7712
77.0318
47.2507
4361436130130
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt101bp_gt95identity_mergedhetalt
96.2901
93.2087
99.5822
26.9805
662948366732828
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_lt51bp_gt95identity_mergedhetalt
97.3592
95.2372
99.5780
26.4946
517925951912222
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_gt95identity_mergedhetalt
96.2933
93.2116
99.5857
27.6338
668748767312828
100.0000
ckim-dragenINDELD6_15lowcmp_Human_Full_Genome_TRDB_hg19_150331_all_mergedhetalt
96.4252
93.5104
99.5276
29.6399
753652375843636
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_diTR_11to50hetalt
97.0497
94.7611
99.4516
24.8186
452225045342525
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_diTR_51to200*
82.6739
80.2710
85.2252
43.8259
948233946164164
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_diTR_51to200het
86.2391
93.9189
79.7203
77.1200
13991142929
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_diTR_51to200hetalt
85.2090
74.3119
99.8512
25.9912
64822467111
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_diTR_51to200homalt
70.6140
100.0000
54.5763
33.4086
1610161134134
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_homopolymer_6to10hetalt
97.2973
97.2973
97.2973
61.4583
3613611
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50hetalt
98.9371
98.3926
99.4876
27.8052
116319116566
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_11to50homalt
99.5305
99.7647
99.2974
52.1032
848284866
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_quadTR_51to200hetalt
97.3061
95.4603
99.2248
24.1920
7573676866
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_11to50*
99.6240
99.5376
99.7106
36.1655
17228172355
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_11to50het
99.7151
99.5733
99.8573
46.9743
700370011
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_11to50hetalt
99.5710
99.3151
99.8282
17.5637
580458111
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_11to50homalt
99.5495
99.7743
99.3258
34.4624
442144233
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_51to200*
97.8571
96.4789
99.2754
43.2099
137513711
100.0000
ckim-dragenINDELD6_15lowcmp_SimpleRepeat_triTR_51to200het
93.6170
91.6667
95.6522
75.0000
2222211
100.0000
ckim-dragenINDELD6_15map_l100_m1_e0homalt
96.8254
95.3125
98.3871
89.1419
6136111
100.0000
ckim-dragenINDELD6_15map_l100_m2_e0homalt
96.8750
95.3846
98.4127
89.4472
6236211
100.0000
ckim-dragenINDELD6_15map_l100_m2_e1homalt
96.9697
95.5224
98.4615
89.3791
6436411
100.0000
ckim-dragenINDELD6_15map_l125_m1_e0homalt
95.5224
94.1176
96.9697
91.0326
3223211
100.0000
ckim-dragenINDELD6_15map_l125_m2_e0homalt
95.7746
94.4444
97.1429
91.1392
3423411
100.0000
ckim-dragenINDELD6_15map_l125_m2_e1homalt
95.8904
94.5946
97.2222
91.1548
3523511
100.0000
ckim-dragenINDELD6_15segduphomalt
95.2381
100.0000
90.9091
93.2927
5005055
100.0000
ckim-dragenINDELI16_PLUS*hetalt
95.3433
91.2297
99.8454
58.3691
1914184193733
100.0000
ckim-dragenINDELI16_PLUSHG002complexvarhomalt
98.8800
100.0000
97.7848
69.3798
309030977
100.0000
ckim-dragenINDELI16_PLUSHG002compoundhet*
93.5490
91.3672
95.8374
52.5778
195818519578585
100.0000
ckim-dragenINDELI16_PLUSHG002compoundhethet
95.7890
95.7447
95.8333
94.6309
4522311
100.0000
ckim-dragenINDELI16_PLUSHG002compoundhethetalt
95.4049
91.2566
99.9482
45.8824
1910183193111
100.0000
ckim-dragenINDELI16_PLUSHG002compoundhethomalt
6.7416
100.0000
3.4884
70.2422
3038383
100.0000
ckim-dragenINDELI16_PLUSlowcmp_AllRepeats_51to200bp_gt95identity_mergedhomalt
96.1538
100.0000
92.5926
92.0118
2502522
100.0000
ckim-dragenINDELI16_PLUSlowcmp_AllRepeats_lt51bp_gt95identity_mergedhetalt
97.8216
96.0549
99.6546
66.2784
5602357722
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331hetalt
97.7620
95.9029
99.6947
70.9147
6322765322
100.0000
ckim-dragenINDELI16_PLUSlowcmp_Human_Full_Genome_TRDB_hg19_150331_TRlt7_51to200bp_gt95identity_merged*
92.7711
88.5057
97.4684
85.1504
77107722
100.0000